Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is hisD [H]
Identifier: 91786706
GI number: 91786706
Start: 830060
End: 831403
Strand: Direct
Name: hisD [H]
Synonym: Bpro_0804
Alternate gene names: 91786706
Gene position: 830060-831403 (Clockwise)
Preceding gene: 91786705
Following gene: 91786707
Centisome position: 15.96
GC content: 65.33
Gene sequence:
>1344_bases ATGAATTTAGTAGCCAACCCCGTACGCCTTTCGACCGCTTCCAGCACATTCGATGCTGAATTCAAGGCGCGCCTGCACTG GTCTGCCGATACCGATGCGGCCATCGAACAGCGGGTGGCTGACATCCTCCTGGACGTGCAGCGGCGCGGCGATACGGCTG TGCTCGAGTACACCGCGCGTTTTGACGGCCTGAGCGTCTCGGCCATGAGTGCGCTGGAGCTCAGCCAGGCCGAGCTGAAG GCCGCGTTTGATGCGATTCCTGCCGCCCAGCGCGCTGCCTTGCAGGCTGCGGCCCGCCGGGTGCGCAGCTACCACGAGGC CCAGAAGAAGGCCAATGGTGAAGGCTGGAGCTACCGTGATGAAGACGGCACCCTGCTCGGCCAGAAGGTCACACCGCTGG ACCGCGTCGGCATCTATGTGCCGGGTGGCAAGGCGGCTTACCCCTCATCGGTGCTGATGAACGCCATTCCGGCCCACGTG GCCGGTGTGGGCGAAATCATCATGGTGGTGCCCACACCCAAGGGCGAGAAGAACCCGCTGGTTCTGGCCGCTGCCTATGT GGCCGGCGTGACGCGCGCCTTCACCATTGGCGGCGCGCAGGCCGTGGCTGCGCTGGCCTACGGTACCTCGACCATTCCCG CGGTCGACAAGATCACCGGCCCCGGCAATGCCTACGTGGCCGCGGCCAAGCGCCGCGTCTTCGGCACGGTGGGCATCGAC ATGATTGCCGGCCCTTCCGAAATCCTGGTGCTGGCCGACGGCAGCACCCCCGTCGACTGGGTGGCCATGGATTTGTTCAG CCAGGCCGAGCACGATGAACTGGCGCAAAGCATTTTGCTGTGTCCGGATGCGGCCTACATCGACCAGGTGCACGAGGCCC TCAACCGCCTGCTGCCTGCCATGCCGCGCGCCGAGATCATTGCCAAATCGCTCAACGGCCGGGGTGTGCTGATCCATACC CGCAGCATGGAAGAGGCCTGCGCCCTCAGCAACCGCATTGCGCCCGAGCACCTGGAAGTCTCCAGCAGCCAGCCGCATGA ATGGGAGCCGCTGCTCAAGCACGCCGGCGCCATCTTCCTCGGCGCCTACACCAGCGAGTCGCTGGGCGACTACTGCGCCG GCCCCAACCACGTGCTGCCCACCAGCGGCACGGCACGCTTTTCCAGCCCGCTGGGCGTGTATGACTTCCAGAAACGCTCC AGCCTGATCGAAGTGAGCGAGCAGGGTGCCCAGACACTGGGCAGGATTGCCGCTGAACTGGCCTACGGCGAAGGTCTGCA GGCGCATGCCCGCGCCGCCGAGATGCGCCTGCACACCGTACCCGATATGAAAGTGACCAAATGA
Upstream 100 bases:
>100_bases GGTGGTCAACCAGACCGCCCTCAAACTCAAGCAGGCGCCCATCCGCAGGCTGATTGACGCCTTGTCCTTGGCCATCACGC AATAGTCCGCAAAGAATGCT
Downstream 100 bases:
>100_bases CCGCGCTGGACCCGAAGTTCAAACAGCTGATTCGCCAGGACGTGCAGTCCATGCATGCCTATGCCATTCAGGACTCCGTT GGCATGGTCAAGCTCGATGC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MNLVANPVRLSTASSTFDAEFKARLHWSADTDAAIEQRVADILLDVQRRGDTAVLEYTARFDGLSVSAMSALELSQAELK AAFDAIPAAQRAALQAAARRVRSYHEAQKKANGEGWSYRDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPAHV AGVGEIIMVVPTPKGEKNPLVLAAAYVAGVTRAFTIGGAQAVAALAYGTSTIPAVDKITGPGNAYVAAAKRRVFGTVGID MIAGPSEILVLADGSTPVDWVAMDLFSQAEHDELAQSILLCPDAAYIDQVHEALNRLLPAMPRAEIIAKSLNGRGVLIHT RSMEEACALSNRIAPEHLEVSSSQPHEWEPLLKHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRS SLIEVSEQGAQTLGRIAAELAYGEGLQAHARAAEMRLHTVPDMKVTK
Sequences:
>Translated_447_residues MNLVANPVRLSTASSTFDAEFKARLHWSADTDAAIEQRVADILLDVQRRGDTAVLEYTARFDGLSVSAMSALELSQAELK AAFDAIPAAQRAALQAAARRVRSYHEAQKKANGEGWSYRDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPAHV AGVGEIIMVVPTPKGEKNPLVLAAAYVAGVTRAFTIGGAQAVAALAYGTSTIPAVDKITGPGNAYVAAAKRRVFGTVGID MIAGPSEILVLADGSTPVDWVAMDLFSQAEHDELAQSILLCPDAAYIDQVHEALNRLLPAMPRAEIIAKSLNGRGVLIHT RSMEEACALSNRIAPEHLEVSSSQPHEWEPLLKHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRS SLIEVSEQGAQTLGRIAAELAYGEGLQAHARAAEMRLHTVPDMKVTK >Mature_447_residues MNLVANPVRLSTASSTFDAEFKARLHWSADTDAAIEQRVADILLDVQRRGDTAVLEYTARFDGLSVSAMSALELSQAELK AAFDAIPAAQRAALQAAARRVRSYHEAQKKANGEGWSYRDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPAHV AGVGEIIMVVPTPKGEKNPLVLAAAYVAGVTRAFTIGGAQAVAALAYGTSTIPAVDKITGPGNAYVAAAKRRVFGTVGID MIAGPSEILVLADGSTPVDWVAMDLFSQAEHDELAQSILLCPDAAYIDQVHEALNRLLPAMPRAEIIAKSLNGRGVLIHT RSMEEACALSNRIAPEHLEVSSSQPHEWEPLLKHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRS SLIEVSEQGAQTLGRIAAELAYGEGLQAHARAAEMRLHTVPDMKVTK
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=413, Percent_Identity=41.4043583535109, Blast_Score=290, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6319819, Length=439, Percent_Identity=36.4464692482916, Blast_Score=263, Evalue=6e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47487; Mature: 47487
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLVANPVRLSTASSTFDAEFKARLHWSADTDAAIEQRVADILLDVQRRGDTAVLEYTAR CCCCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHH FDGLSVSAMSALELSQAELKAAFDAIPAAQRAALQAAARRVRSYHEAQKKANGEGWSYRD CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC EDGTLLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPAHVAGVGEIIMVVPTPKGEKNPL CCCCEECCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCE VLAAAYVAGVTRAFTIGGAQAVAALAYGTSTIPAVDKITGPGNAYVAAAKRRVFGTVGID EEEHHHHHHHHHHEECCCHHHHHHHHHCCCCCCCHHCCCCCCCCEEHHHHHHHHEECCHH MIAGPSEILVLADGSTPVDWVAMDLFSQAEHDELAQSILLCPDAAYIDQVHEALNRLLPA EECCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC MPRAEIIAKSLNGRGVLIHTRSMEEACALSNRIAPEHLEVSSSQPHEWEPLLKHAGAIFL CCHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHCCEEEE GAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIEVSEQGAQTLGRIAAEL EECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYGEGLQAHARAAEMRLHTVPDMKVTK HHCCCHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MNLVANPVRLSTASSTFDAEFKARLHWSADTDAAIEQRVADILLDVQRRGDTAVLEYTAR CCCCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHH FDGLSVSAMSALELSQAELKAAFDAIPAAQRAALQAAARRVRSYHEAQKKANGEGWSYRD CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC EDGTLLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPAHVAGVGEIIMVVPTPKGEKNPL CCCCEECCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCE VLAAAYVAGVTRAFTIGGAQAVAALAYGTSTIPAVDKITGPGNAYVAAAKRRVFGTVGID EEEHHHHHHHHHHEECCCHHHHHHHHHCCCCCCCHHCCCCCCCCEEHHHHHHHHEECCHH MIAGPSEILVLADGSTPVDWVAMDLFSQAEHDELAQSILLCPDAAYIDQVHEALNRLLPA EECCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC MPRAEIIAKSLNGRGVLIHTRSMEEACALSNRIAPEHLEVSSSQPHEWEPLLKHAGAIFL CCHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHCCEEEE GAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIEVSEQGAQTLGRIAAEL EECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYGEGLQAHARAAEMRLHTVPDMKVTK HHCCCHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]