Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is aroB [H]
Identifier: 91786689
GI number: 91786689
Start: 809776
End: 810942
Strand: Direct
Name: aroB [H]
Synonym: Bpro_0787
Alternate gene names: 91786689
Gene position: 809776-810942 (Clockwise)
Preceding gene: 91786688
Following gene: 91786690
Centisome position: 15.57
GC content: 62.47
Gene sequence:
>1167_bases ATGACCGGGAGAGACCCCCAAGGATCGTGGAGTGCCTCTACACTTGCGCTTATGCAAGCAAACACTTCCCCTGCTGTGGC GCGGGTTCATATCCATCTGGCCGAGCGCAGCTATCCGATAGTCATCGGTGCGGGCCTGCTGGGCAGTGCGTCGACCTACG AGCAATTGCCCAAGGCCACGACGGCGCTTATCGTCTCCAATACCACTGTCGCTCCCCTCTATGCGGCTCCGCTCGCCCAC GCCCTCCGAACGCGCTACCAGAAGGTCTTGCAGGTGACCTTGCCCGATGGCGAGGACCATAAAGACTGGCCCACGCTACA GCTGATTTTTGACGCGCTGCTGGGAAATGGTTGTGATCGTAAAACCGTGCTGTTTGCGCTGGGCGGTGGGGTCGTCGGCG ACATGACGGGTTTTGCCGCCGCAAGCTACATGCGCGGCGTGCCCTTCGTGCAGGTGCCTACAACCCTGCTGGCCCAGGTG GATTCATCGGTAGGCGGCAAGACAGCCATCAACCACCCACTGGGGAAAAACATGATCGGCGCGTTCTATCAGCCGCTCCA GGTCGTGTGCGACCTGGACGCTCTCGCCACGCTGCCGCCGCGCGAACTGAGCGCGGGCCTGGCCGAGATCATCAAATACG GGCCGATCGCCGACATGGTGTTTCTCGACTGGATTGAAGGCCACCTCGAGGCCTTGATGAGCAAGGACCCGGCCGCACTG GCGCATGCCATTCAGCGCAGCTGCGAGATCAAGGCCTGGGTGGTGGGGCAGGACGAACGCGAATCCGGCTTGCGGGCGAT CTTGAATTTCGGCCACACTTTTGGCCACGCGATTGAGTCGGGGCTGGGCTATGGGGTGTGGCTGCACGGCGAGGGCGTGG GCTGCGGCATGGTGATGGCGGCGCATTTGTCACAGCGCCTGGGCTTGGTCGACATGGCTTTTGTCGATCGCCTGACAGGA CTTGTCCTGCGTGCCGGCCTGCCCGTCAAGGGGCCTGTGCTGTCCGCCACTGACAATGCCGGCCGTTATCTGGAGCTGAT GCGCGTCGATAAAAAATCCGAGGCCGGTGAAATCCGCTTCGTGGTGATTGATGGGCCTGGCAAGGCGGCGGTGCGTGGCG CACCCGATGCGCTGGTGCGCGAAGTCATCGATGCCTGTTGTGCGTGA
Upstream 100 bases:
>100_bases TGGTGAACATGATCCTCATGCAGCTGGAACTGGCGGGCGTGGTTCCTGCGCCTTAGCCTGGTGTCACCTGCCAGGCTCGG GCTGCTGCGGTAACGAAGCA
Downstream 100 bases:
>100_bases TGGGCGATGGGGCCGGTAAATGTTGCCGATTTCATGAAGGCTGGAAGCTGTCTGGATGAGTGAGTCATGAGTGCTGCGGC CTATGCTTGTGATCCGGCGC
Product: 3-dehydroquinate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTGRDPQGSWSASTLALMQANTSPAVARVHIHLAERSYPIVIGAGLLGSASTYEQLPKATTALIVSNTTVAPLYAAPLAH ALRTRYQKVLQVTLPDGEDHKDWPTLQLIFDALLGNGCDRKTVLFALGGGVVGDMTGFAAASYMRGVPFVQVPTTLLAQV DSSVGGKTAINHPLGKNMIGAFYQPLQVVCDLDALATLPPRELSAGLAEIIKYGPIADMVFLDWIEGHLEALMSKDPAAL AHAIQRSCEIKAWVVGQDERESGLRAILNFGHTFGHAIESGLGYGVWLHGEGVGCGMVMAAHLSQRLGLVDMAFVDRLTG LVLRAGLPVKGPVLSATDNAGRYLELMRVDKKSEAGEIRFVVIDGPGKAAVRGAPDALVREVIDACCA
Sequences:
>Translated_388_residues MTGRDPQGSWSASTLALMQANTSPAVARVHIHLAERSYPIVIGAGLLGSASTYEQLPKATTALIVSNTTVAPLYAAPLAH ALRTRYQKVLQVTLPDGEDHKDWPTLQLIFDALLGNGCDRKTVLFALGGGVVGDMTGFAAASYMRGVPFVQVPTTLLAQV DSSVGGKTAINHPLGKNMIGAFYQPLQVVCDLDALATLPPRELSAGLAEIIKYGPIADMVFLDWIEGHLEALMSKDPAAL AHAIQRSCEIKAWVVGQDERESGLRAILNFGHTFGHAIESGLGYGVWLHGEGVGCGMVMAAHLSQRLGLVDMAFVDRLTG LVLRAGLPVKGPVLSATDNAGRYLELMRVDKKSEAGEIRFVVIDGPGKAAVRGAPDALVREVIDACCA >Mature_387_residues TGRDPQGSWSASTLALMQANTSPAVARVHIHLAERSYPIVIGAGLLGSASTYEQLPKATTALIVSNTTVAPLYAAPLAHA LRTRYQKVLQVTLPDGEDHKDWPTLQLIFDALLGNGCDRKTVLFALGGGVVGDMTGFAAASYMRGVPFVQVPTTLLAQVD SSVGGKTAINHPLGKNMIGAFYQPLQVVCDLDALATLPPRELSAGLAEIIKYGPIADMVFLDWIEGHLEALMSKDPAALA HAIQRSCEIKAWVVGQDERESGLRAILNFGHTFGHAIESGLGYGVWLHGEGVGCGMVMAAHLSQRLGLVDMAFVDRLTGL VLRAGLPVKGPVLSATDNAGRYLELMRVDKKSEAGEIRFVVIDGPGKAAVRGAPDALVREVIDACCA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; second step. [C]
COG id: COG0337
COG function: function code E; 3-dehydroquinate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dehydroquinate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1789791, Length=360, Percent_Identity=55.2777777777778, Blast_Score=358, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6320332, Length=315, Percent_Identity=40.9523809523809, Blast_Score=204, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016303 - InterPro: IPR002658 - InterPro: IPR016037 [H]
Pfam domain/function: PF01761 DHQ_synthase [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 41095; Mature: 40964
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRDPQGSWSASTLALMQANTSPAVARVHIHLAERSYPIVIGAGLLGSASTYEQLPKAT CCCCCCCCCCCHHEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHHCCCHH TALIVSNTTVAPLYAAPLAHALRTRYQKVLQVTLPDGEDHKDWPTLQLIFDALLGNGCDR EEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC KTVLFALGGGVVGDMTGFAAASYMRGVPFVQVPTTLLAQVDSSVGGKTAINHPLGKNMIG CEEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHH AFYQPLQVVCDLDALATLPPRELSAGLAEIIKYGPIADMVFLDWIEGHLEALMSKDPAAL HHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHH AHAIQRSCEIKAWVVGQDERESGLRAILNFGHTFGHAIESGLGYGVWLHGEGVGCGMVMA HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH AHLSQRLGLVDMAFVDRLTGLVLRAGLPVKGPVLSATDNAGRYLELMRVDKKSEAGEIRF HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCEEE VVIDGPGKAAVRGAPDALVREVIDACCA EEEECCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TGRDPQGSWSASTLALMQANTSPAVARVHIHLAERSYPIVIGAGLLGSASTYEQLPKAT CCCCCCCCCCHHEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHHCCCHH TALIVSNTTVAPLYAAPLAHALRTRYQKVLQVTLPDGEDHKDWPTLQLIFDALLGNGCDR EEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC KTVLFALGGGVVGDMTGFAAASYMRGVPFVQVPTTLLAQVDSSVGGKTAINHPLGKNMIG CEEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHH AFYQPLQVVCDLDALATLPPRELSAGLAEIIKYGPIADMVFLDWIEGHLEALMSKDPAAL HHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHH AHAIQRSCEIKAWVVGQDERESGLRAILNFGHTFGHAIESGLGYGVWLHGEGVGCGMVMA HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH AHLSQRLGLVDMAFVDRLTGLVLRAGLPVKGPVLSATDNAGRYLELMRVDKKSEAGEIRF HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCEEE VVIDGPGKAAVRGAPDALVREVIDACCA EEEECCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA