Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is aroK [H]
Identifier: 91786688
GI number: 91786688
Start: 809207
End: 809731
Strand: Direct
Name: aroK [H]
Synonym: Bpro_0786
Alternate gene names: 91786688
Gene position: 809207-809731 (Clockwise)
Preceding gene: 91786687
Following gene: 91786689
Centisome position: 15.56
GC content: 60.19
Gene sequence:
>525_bases TTGAAAATAGCCTGTGTGGGCCTGCCGGGATCGGGAAAGTCCACGGTGGGCAGGCAGCTTGCCCGCAGGCTGGGTTTGCC ATTCGTTGATTCAGACCAGGTCATAGAGCAGCGTATCGGCTGCTCCATTCGCGAGTTTTTTGAGCGTGAGGGCGAGGCTT CATTCCGTGATCTTGAACAGCTGGTCATCGATGAGTTGACCCAAGGAGGGGCCTGTGTGCTCTCCACCGGCGGCGGTAGC GTGCTCCGCCCTGTGAACCGCGAGCATTTGCGGGGGCGGGCGCAGGTCGTATATTTGCATTCGGCGCCGGAAGAGGTTTT TCGGCGCTTGCGGCATGACCAGAACCGGCCGCTGCTTCAGGTCGCTGATCCACTGGCCCGATTGCGCGATCTTTACATCG CACGCGATCCGCTGTATCGGGAAACCGCCCAATTCGTGATTGAAACCGGCCGTCCTTCGGTGTCCACCCTGGTGAACATG ATCCTCATGCAGCTGGAACTGGCGGGCGTGGTTCCTGCGCCTTAG
Upstream 100 bases:
>100_bases TGTCAGCTTTTCTCTTTGTTGCACGCCCCGATTTCGGGGGTGTTTTCATTCTGATGCCCGCGGCGCTGGCATACTGCGTA TCCAAGTGAATGCAAACCTG
Downstream 100 bases:
>100_bases CCTGGTGTCACCTGCCAGGCTCGGGCTGCTGCGGTAACGAAGCAATGACCGGGAGAGACCCCCAAGGATCGTGGAGTGCC TCTACACTTGCGCTTATGCA
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKIACVGLPGSGKSTVGRQLARRLGLPFVDSDQVIEQRIGCSIREFFEREGEASFRDLEQLVIDELTQGGACVLSTGGGS VLRPVNREHLRGRAQVVYLHSAPEEVFRRLRHDQNRPLLQVADPLARLRDLYIARDPLYRETAQFVIETGRPSVSTLVNM ILMQLELAGVVPAP
Sequences:
>Translated_174_residues MKIACVGLPGSGKSTVGRQLARRLGLPFVDSDQVIEQRIGCSIREFFEREGEASFRDLEQLVIDELTQGGACVLSTGGGS VLRPVNREHLRGRAQVVYLHSAPEEVFRRLRHDQNRPLLQVADPLARLRDLYIARDPLYRETAQFVIETGRPSVSTLVNM ILMQLELAGVVPAP >Mature_174_residues MKIACVGLPGSGKSTVGRQLARRLGLPFVDSDQVIEQRIGCSIREFFEREGEASFRDLEQLVIDELTQGGACVLSTGGGS VLRPVNREHLRGRAQVVYLHSAPEEVFRRLRHDQNRPLLQVADPLARLRDLYIARDPLYRETAQFVIETGRPSVSTLVNM ILMQLELAGVVPAP
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=45.1807228915663, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI1786587, Length=153, Percent_Identity=35.2941176470588, Blast_Score=81, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320332, Length=151, Percent_Identity=29.1390728476821, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19346; Mature: 19346
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIACVGLPGSGKSTVGRQLARRLGLPFVDSDQVIEQRIGCSIREFFEREGEASFRDLEQ CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHH LVIDELTQGGACVLSTGGGSVLRPVNREHLRGRAQVVYLHSAPEEVFRRLRHDQNRPLLQ HHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCHHH VADPLARLRDLYIARDPLYRETAQFVIETGRPSVSTLVNMILMQLELAGVVPAP HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIACVGLPGSGKSTVGRQLARRLGLPFVDSDQVIEQRIGCSIREFFEREGEASFRDLEQ CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHH LVIDELTQGGACVLSTGGGSVLRPVNREHLRGRAQVVYLHSAPEEVFRRLRHDQNRPLLQ HHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCHHH VADPLARLRDLYIARDPLYRETAQFVIETGRPSVSTLVNMILMQLELAGVVPAP HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA