The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ccsB [H]

Identifier: 91786675

GI number: 91786675

Start: 793635

End: 795854

Strand: Direct

Name: ccsB [H]

Synonym: Bpro_0773

Alternate gene names: 91786675

Gene position: 793635-795854 (Clockwise)

Preceding gene: 91786674

Following gene: 91786676

Centisome position: 15.26

GC content: 63.29

Gene sequence:

>2220_bases
ATGACAGTTTCCACCCAAGGCATGAAAGTTCATTGGGGCTCCCGCTCCCTGCGGGCGTCCGTGGAGTTGCTGTCGTCCAT
GCGGTTTTCCATCTCGCTGCTGACCGTCATCTGCATTGCTTCGGTCATTGGCACGGTGCTCAAGCAGCAGGAGCCGCTGG
GCAATTACGTGAACCAGTTCGGGCCGTTCTGGGCGCAGGTGTTCAGCCTGGTCAGCCTGAACACGGTCTACAGCGCCTGG
TGGTTTTTGCTGATTCTGGCTTTTCTGGTCACCAGCACCAGCCTGTGCATTGCCCGCAACGCGCCAAAAATCCTGGCCGA
CCTGAATCACCTCAAGGAAAACGTCCGCGAACAAAGCCTGAAGGCCTTTGGCCACCGCGCCGAGGGGGCCTTGTCCGAGG
CGCCCGAGGCGGCCGCCCGGCGCATTGGCCAGACGCTGGTGCAAAGCGGCTGGAAGGTGAAACTGCAGCACAGGCCATCG
TCTGGCGGCTGGATGGTGGCCGCCAAAAAAGGCGCGGCCAACAAACTGGGGTACATCGCGGCACACAGCGCCATTGTGCT
GGTGTGCGTGGGCGGCCTGCTCGATGGCGACATGGTGGTGCGCGCGCAGATGTGGCTGGGCGGCAAGTCCACCTACACCG
GCGGCGGGTTGATTGCCGACGTGCCGGCCCAGCACCGCCTGAGTGACCGCAACCCGACCTTTCGGGGCAACCTCCTGGTG
GCCGAAGGTACGCAATCGGGCACCGCCATCCTGAACCAGCCGGGCGGGGTGCTGTTGCAGGAGCTGCCGTTTGCGATCGA
GTTGAAGAAGTTCATCGTCGAGTACTACTCCACCGGCATGCCCAAGCTGTTTGCCAGCGACATCATCATTCATGACAGGG
AAACCGGCGAAAAGATTCCGGCACGGGTGGAAGTCAATCACCCGGCACGCCACAAGGGCATAGAGATCTACCAGTCCAGC
TTTGACGACGGCGGCTCCAGTGTCACGCTCAAGGCGATTCCGCTGGCCCCCACGGCCAAGGCGTTTGAGATCCAGGGCAC
GATTGGCGGCGCCAGCAGCCTGACCAATGGCGCGGACAAGCTGACACTCGAGTACACCGGGCTGCGTGTCATCAACGTGG
AAAATTTCGCGTCCGCCAGCACCTTGGGGGCGGGCTCGGGGGTGGATGTGCGCAAGGTTGACCTGCACCAGGCCATTGAC
ACGCGGCTGGGGGCGGCCAACAAGACGGTGACCCGCAAGGATCTGCGCAACATCGGCCCCAGCGTGAGCTACAAGCTGCG
CGATGCCGCGGGCCAGGCCCGTGAATTCAACAACTACATGCTGCCCGTCAAGATGGACGACGGCACGGACAGCCCGGCGG
TGTACCTGTTGGGTGTGCGCGAAACGCCGGCCGACCCATTTCAGTACCTGCGCATTCCCGTGGACGCGGAAGGCAGCATG
GACACCTTTTTGCGCTTGCGCGCCGCGCTGGCCGATCCGGTGCAGCGCGAACTGGCCGTCAAGCGTTATGCCAGCCAAGC
GATTGGCGCCGACCGGCCGGAACTGGCGCAGCAGCTGACGGCGTCGGCCTCGCGCGCGCTGGCCCTGTTTGCGGGGGCTG
GGCCTGATGGCGCGCCGTCGGGCAATGCCAAAACGCCGGCCGGCCTGCAGGCCATCTCCGACTTCATGGAAGCGAATGTG
CCCGAGGCCGAGCGCAACCGCGCGGGCGAGGTGCTGATCCGCATCCTCAATGGCGTGCTGTTTGAGCTGACCCAGATGAC
GCGAGCGAAAAACGGCCTCAAGCCGCTGGCGCAGGACGACAAGACGCAGGGGTTCATGTCCCAGATGGTGCTCAGCCTGT
CGGATGCCCATCACTATCCGGCCCCCATGGCCTTTGTGCTGAAAGACTTCACCCAGGTGCAGGCCAGCGTGTTTCAGGTT
GCCCGGGCGCCGGGCAGGAATATTGTCTACCTGGGCTGTGCCTTCCTGATCCTGGGGGTGTTCGCCATGCTGTACGTGCG
GGAGCGCCGGGTCTGGGTCTGGCTGGCCCCGGGTGGCGGGAATTCAGGTCATTCGGACAATTCGGGTCATTCCGGCGAGG
GCAGCGGTTTGGCGCATTCAGTGCCAGAATCAGGCACCAGCAGCCTCGCCACGATGGCCTTGTCCACCAACCGCAAAACC
ATGGATGGCGACAAGGAGTTTGAGATGTTGAAAATGAAACTGTTGCAGGCGCCTTTATGA

Upstream 100 bases:

>100_bases
GCCTCCAAAACCAATCACACCATGGCGGGTCTTTCTGATGAAAGTCCCGCCTTTTTCTTTTTGTTGACCTTCTGACCCGG
CACACGGCCCCATTTCACGC

Downstream 100 bases:

>100_bases
ACACCCCCTCTGGTTACACCGCAGCCGTCAACACCACCACGCTGACGGCGGGGCGTCGTTCGGGGCAAGACAGTACGCTC
GACCTGAATGAAGGCTATTT

Product: ResB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 738

Protein sequence:

>739_residues
MTVSTQGMKVHWGSRSLRASVELLSSMRFSISLLTVICIASVIGTVLKQQEPLGNYVNQFGPFWAQVFSLVSLNTVYSAW
WFLLILAFLVTSTSLCIARNAPKILADLNHLKENVREQSLKAFGHRAEGALSEAPEAAARRIGQTLVQSGWKVKLQHRPS
SGGWMVAAKKGAANKLGYIAAHSAIVLVCVGGLLDGDMVVRAQMWLGGKSTYTGGGLIADVPAQHRLSDRNPTFRGNLLV
AEGTQSGTAILNQPGGVLLQELPFAIELKKFIVEYYSTGMPKLFASDIIIHDRETGEKIPARVEVNHPARHKGIEIYQSS
FDDGGSSVTLKAIPLAPTAKAFEIQGTIGGASSLTNGADKLTLEYTGLRVINVENFASASTLGAGSGVDVRKVDLHQAID
TRLGAANKTVTRKDLRNIGPSVSYKLRDAAGQAREFNNYMLPVKMDDGTDSPAVYLLGVRETPADPFQYLRIPVDAEGSM
DTFLRLRAALADPVQRELAVKRYASQAIGADRPELAQQLTASASRALALFAGAGPDGAPSGNAKTPAGLQAISDFMEANV
PEAERNRAGEVLIRILNGVLFELTQMTRAKNGLKPLAQDDKTQGFMSQMVLSLSDAHHYPAPMAFVLKDFTQVQASVFQV
ARAPGRNIVYLGCAFLILGVFAMLYVRERRVWVWLAPGGGNSGHSDNSGHSGEGSGLAHSVPESGTSSLATMALSTNRKT
MDGDKEFEMLKMKLLQAPL

Sequences:

>Translated_739_residues
MTVSTQGMKVHWGSRSLRASVELLSSMRFSISLLTVICIASVIGTVLKQQEPLGNYVNQFGPFWAQVFSLVSLNTVYSAW
WFLLILAFLVTSTSLCIARNAPKILADLNHLKENVREQSLKAFGHRAEGALSEAPEAAARRIGQTLVQSGWKVKLQHRPS
SGGWMVAAKKGAANKLGYIAAHSAIVLVCVGGLLDGDMVVRAQMWLGGKSTYTGGGLIADVPAQHRLSDRNPTFRGNLLV
AEGTQSGTAILNQPGGVLLQELPFAIELKKFIVEYYSTGMPKLFASDIIIHDRETGEKIPARVEVNHPARHKGIEIYQSS
FDDGGSSVTLKAIPLAPTAKAFEIQGTIGGASSLTNGADKLTLEYTGLRVINVENFASASTLGAGSGVDVRKVDLHQAID
TRLGAANKTVTRKDLRNIGPSVSYKLRDAAGQAREFNNYMLPVKMDDGTDSPAVYLLGVRETPADPFQYLRIPVDAEGSM
DTFLRLRAALADPVQRELAVKRYASQAIGADRPELAQQLTASASRALALFAGAGPDGAPSGNAKTPAGLQAISDFMEANV
PEAERNRAGEVLIRILNGVLFELTQMTRAKNGLKPLAQDDKTQGFMSQMVLSLSDAHHYPAPMAFVLKDFTQVQASVFQV
ARAPGRNIVYLGCAFLILGVFAMLYVRERRVWVWLAPGGGNSGHSDNSGHSGEGSGLAHSVPESGTSSLATMALSTNRKT
MDGDKEFEMLKMKLLQAPL
>Mature_738_residues
TVSTQGMKVHWGSRSLRASVELLSSMRFSISLLTVICIASVIGTVLKQQEPLGNYVNQFGPFWAQVFSLVSLNTVYSAWW
FLLILAFLVTSTSLCIARNAPKILADLNHLKENVREQSLKAFGHRAEGALSEAPEAAARRIGQTLVQSGWKVKLQHRPSS
GGWMVAAKKGAANKLGYIAAHSAIVLVCVGGLLDGDMVVRAQMWLGGKSTYTGGGLIADVPAQHRLSDRNPTFRGNLLVA
EGTQSGTAILNQPGGVLLQELPFAIELKKFIVEYYSTGMPKLFASDIIIHDRETGEKIPARVEVNHPARHKGIEIYQSSF
DDGGSSVTLKAIPLAPTAKAFEIQGTIGGASSLTNGADKLTLEYTGLRVINVENFASASTLGAGSGVDVRKVDLHQAIDT
RLGAANKTVTRKDLRNIGPSVSYKLRDAAGQAREFNNYMLPVKMDDGTDSPAVYLLGVRETPADPFQYLRIPVDAEGSMD
TFLRLRAALADPVQRELAVKRYASQAIGADRPELAQQLTASASRALALFAGAGPDGAPSGNAKTPAGLQAISDFMEANVP
EAERNRAGEVLIRILNGVLFELTQMTRAKNGLKPLAQDDKTQGFMSQMVLSLSDAHHYPAPMAFVLKDFTQVQASVFQVA
RAPGRNIVYLGCAFLILGVFAMLYVRERRVWVWLAPGGGNSGHSDNSGHSGEGSGLAHSVPESGTSSLATMALSTNRKTM
DGDKEFEMLKMKLLQAPL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 79444; Mature: 79313

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSTQGMKVHWGSRSLRASVELLSSMRFSISLLTVICIASVIGTVLKQQEPLGNYVNQF
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GPFWAQVFSLVSLNTVYSAWWFLLILAFLVTSTSLCIARNAPKILADLNHLKENVREQSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHH
KAFGHRAEGALSEAPEAAARRIGQTLVQSGWKVKLQHRPSSGGWMVAAKKGAANKLGYIA
HHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHH
AHSAIVLVCVGGLLDGDMVVRAQMWLGGKSTYTGGGLIADVPAQHRLSDRNPTFRGNLLV
HHHHHHHHHHHCCCCCCEEEEEEEHCCCCCCCCCCCEEECCCCHHCCCCCCCCEECCEEE
AEGTQSGTAILNQPGGVLLQELPFAIELKKFIVEYYSTGMPKLFASDIIIHDRETGEKIP
EECCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCC
ARVEVNHPARHKGIEIYQSSFDDGGSSVTLKAIPLAPTAKAFEIQGTIGGASSLTNGADK
CEEEECCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHCCCCCCE
LTLEYTGLRVINVENFASASTLGAGSGVDVRKVDLHQAIDTRLGAANKTVTRKDLRNIGP
EEEEECCEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCC
SVSYKLRDAAGQAREFNNYMLPVKMDDGTDSPAVYLLGVRETPADPFQYLRIPVDAEGSM
CCEEEEHHHCCHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHEEEEECCCCCCH
DTFLRLRAALADPVQRELAVKRYASQAIGADRPELAQQLTASASRALALFAGAGPDGAPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCC
GNAKTPAGLQAISDFMEANVPEAERNRAGEVLIRILNGVLFELTQMTRAKNGLKPLAQDD
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KTQGFMSQMVLSLSDAHHYPAPMAFVLKDFTQVQASVFQVARAPGRNIVYLGCAFLILGV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
FAMLYVRERRVWVWLAPGGGNSGHSDNSGHSGEGSGLAHSVPESGTSSLATMALSTNRKT
HHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCC
MDGDKEFEMLKMKLLQAPL
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVSTQGMKVHWGSRSLRASVELLSSMRFSISLLTVICIASVIGTVLKQQEPLGNYVNQF
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GPFWAQVFSLVSLNTVYSAWWFLLILAFLVTSTSLCIARNAPKILADLNHLKENVREQSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHH
KAFGHRAEGALSEAPEAAARRIGQTLVQSGWKVKLQHRPSSGGWMVAAKKGAANKLGYIA
HHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHH
AHSAIVLVCVGGLLDGDMVVRAQMWLGGKSTYTGGGLIADVPAQHRLSDRNPTFRGNLLV
HHHHHHHHHHHCCCCCCEEEEEEEHCCCCCCCCCCCEEECCCCHHCCCCCCCCEECCEEE
AEGTQSGTAILNQPGGVLLQELPFAIELKKFIVEYYSTGMPKLFASDIIIHDRETGEKIP
EECCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCC
ARVEVNHPARHKGIEIYQSSFDDGGSSVTLKAIPLAPTAKAFEIQGTIGGASSLTNGADK
CEEEECCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHCCCCCCE
LTLEYTGLRVINVENFASASTLGAGSGVDVRKVDLHQAIDTRLGAANKTVTRKDLRNIGP
EEEEECCEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCC
SVSYKLRDAAGQAREFNNYMLPVKMDDGTDSPAVYLLGVRETPADPFQYLRIPVDAEGSM
CCEEEEHHHCCHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHEEEEECCCCCCH
DTFLRLRAALADPVQRELAVKRYASQAIGADRPELAQQLTASASRALALFAGAGPDGAPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCC
GNAKTPAGLQAISDFMEANVPEAERNRAGEVLIRILNGVLFELTQMTRAKNGLKPLAQDD
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KTQGFMSQMVLSLSDAHHYPAPMAFVLKDFTQVQASVFQVARAPGRNIVYLGCAFLILGV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
FAMLYVRERRVWVWLAPGGGNSGHSDNSGHSGEGSGLAHSVPESGTSSLATMALSTNRKT
HHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCC
MDGDKEFEMLKMKLLQAPL
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA