Click here to switch to the map view.

The map label for this gene is ccsA [H]

Identifier: 91786676

GI number: 91786676

Start: 795851

End: 797248

Strand: Direct

Name: ccsA [H]

Synonym: Bpro_0774

Alternate gene names: 91786676

Gene position: 795851-797248 (Clockwise)

Preceding gene: 91786675

Following gene: 91786677

Centisome position: 15.3

GC content: 61.66

Gene sequence:

>1398_bases
ATGAACACCCCCTCTGGTTACACCGCAGCCGTCAACACCACCACGCTGACGGCGGGGCGTCGTTCGGGGCAAGACAGTAC
GCTCGACCTGAATGAAGGCTATTTCGCCCGGCGTAACGCGCTGGACTGGGTGTTCGCAGTGTTGGTGCTGGCGGGCGGCC
TGTACGCCTTTGCCCGTTACAACGCGTTCATGGATGTCTACGAAAAGGGCATCTTGCTGGCCGCCATGCCGGCCGCCATG
GCCATGGGCTGGTTCTGGCGTCCCTTGCGGGTGCTGATGGCGGCCGTTACCGGCTTTGCCCTGCTCGGCATCATGTCTTA
CCAGGGGGACCTGGCGCGGGCGGAGCAGGTATTTTGGCTCAAGTATTTCCTCTCCAGCCAGTCGGCCATCCTGTGGATGA
GCGTGCTCTTTTTCATGAGCACGATTTTTTACTGGCTCGGGATGTTTGCCGGGCGTGAGGGTTCGGGCCAGAGCGCGACG
CTGGAATCCCTGGGCTCGAAAATCGCCTGGGTGGCCGTGGGCATGGCCTTGATCGGCACGCTGGTGCGCTGGTACGAAAG
CTACCTGATCGGCGCCGACATCGGGCACATCCCCGTGAGCAACCTGTATGAGGTGTTCGTGCTGTTTTGCTGGATGACAG
CGGCGTTTTACCTCTACTTTGAAGCGCAGTACGACACCCGCGCCCTGGGTGCCTTCGTGATGCTGGTGGTGAGTGCCGCC
GTCGGATTCCTCCTGTGGTACACCGTGGTGCGCGAAGCCCATGAAATCCAGCCCCTGGTGCCGGCCCTCAAAAGCTGGTG
GATGAAGCTGCATGTACCCGCCAACTTCATCGGCTACGGCATGTTCTCGCTGTCGGCCATGGTGTCGCTGTCTTACCTGA
TCAAACAGCAGGCCGGCGAAACCCGCTGGTACAAACTCACCCCCTTGTGGCTGCTGGGCGTGGTGCTGTGTTTCGTGCCA
ATTGTTTTCCGCAAGTCGCCCGCCGAGGTGGGCGGCGGCAATTACTGGGCCGGATATCTGCTGGTGTCGGGACTGATTGC
CGGCGGGATTTTGCTGGGCCGCCAGCGCATTGCCGCGCGCCTGCCCAGCTTTGAAATACTGGACGACGTGATGTACAAGG
CCATCGCCGTTGGCTTTGCCTTTTTCACGATCGCCACCGTGCTGGGCGCGCTGTGGGCCGCTGAGGCCTGGGGTGGCTAC
TGGAGCTGGGATCCGAAGGAAACCTGGGCCCTGATTGTCTGGCTGAATTACGCCGCGTGGCTGCACATGCGGCTGATGAA
AGGCCTGCGCGGAACGGTCGCCGCCTGGTGGGCGCTGGTCGGTCTGGCGGTTACCACCTTTGCCTTTCTGGGTGTCAACA
TGTTCCTGTCGGGCCTGCACAGTTACGGAACCTTGTAG

Upstream 100 bases:

>100_bases
CCAGCAGCCTCGCCACGATGGCCTTGTCCACCAACCGCAAAACCATGGATGGCGACAAGGAGTTTGAGATGTTGAAAATG
AAACTGTTGCAGGCGCCTTT

Downstream 100 bases:

>100_bases
CCCCGAGCGGGTCCTGATAAACATCCATGTAAGAGTTGGCTGCGCAAACAGACTAACTGACAAAGTTACTTTCAAGGACC
CCAGATGCTCATCAAGACGA

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MNTPSGYTAAVNTTTLTAGRRSGQDSTLDLNEGYFARRNALDWVFAVLVLAGGLYAFARYNAFMDVYEKGILLAAMPAAM
AMGWFWRPLRVLMAAVTGFALLGIMSYQGDLARAEQVFWLKYFLSSQSAILWMSVLFFMSTIFYWLGMFAGREGSGQSAT
LESLGSKIAWVAVGMALIGTLVRWYESYLIGADIGHIPVSNLYEVFVLFCWMTAAFYLYFEAQYDTRALGAFVMLVVSAA
VGFLLWYTVVREAHEIQPLVPALKSWWMKLHVPANFIGYGMFSLSAMVSLSYLIKQQAGETRWYKLTPLWLLGVVLCFVP
IVFRKSPAEVGGGNYWAGYLLVSGLIAGGILLGRQRIAARLPSFEILDDVMYKAIAVGFAFFTIATVLGALWAAEAWGGY
WSWDPKETWALIVWLNYAAWLHMRLMKGLRGTVAAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL

Sequences:

>Translated_465_residues
MNTPSGYTAAVNTTTLTAGRRSGQDSTLDLNEGYFARRNALDWVFAVLVLAGGLYAFARYNAFMDVYEKGILLAAMPAAM
AMGWFWRPLRVLMAAVTGFALLGIMSYQGDLARAEQVFWLKYFLSSQSAILWMSVLFFMSTIFYWLGMFAGREGSGQSAT
LESLGSKIAWVAVGMALIGTLVRWYESYLIGADIGHIPVSNLYEVFVLFCWMTAAFYLYFEAQYDTRALGAFVMLVVSAA
VGFLLWYTVVREAHEIQPLVPALKSWWMKLHVPANFIGYGMFSLSAMVSLSYLIKQQAGETRWYKLTPLWLLGVVLCFVP
IVFRKSPAEVGGGNYWAGYLLVSGLIAGGILLGRQRIAARLPSFEILDDVMYKAIAVGFAFFTIATVLGALWAAEAWGGY
WSWDPKETWALIVWLNYAAWLHMRLMKGLRGTVAAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL
>Mature_465_residues
MNTPSGYTAAVNTTTLTAGRRSGQDSTLDLNEGYFARRNALDWVFAVLVLAGGLYAFARYNAFMDVYEKGILLAAMPAAM
AMGWFWRPLRVLMAAVTGFALLGIMSYQGDLARAEQVFWLKYFLSSQSAILWMSVLFFMSTIFYWLGMFAGREGSGQSAT
LESLGSKIAWVAVGMALIGTLVRWYESYLIGADIGHIPVSNLYEVFVLFCWMTAAFYLYFEAQYDTRALGAFVMLVVSAA
VGFLLWYTVVREAHEIQPLVPALKSWWMKLHVPANFIGYGMFSLSAMVSLSYLIKQQAGETRWYKLTPLWLLGVVLCFVP
IVFRKSPAEVGGGNYWAGYLLVSGLIAGGILLGRQRIAARLPSFEILDDVMYKAIAVGFAFFTIATVLGALWAAEAWGGY
WSWDPKETWALIVWLNYAAWLHMRLMKGLRGTVAAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 51738; Mature: 51738

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPSGYTAAVNTTTLTAGRRSGQDSTLDLNEGYFARRNALDWVFAVLVLAGGLYAFARY
CCCCCCCEEEEECEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NAFMDVYEKGILLAAMPAAMAMGWFWRPLRVLMAAVTGFALLGIMSYQGDLARAEQVFWL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KYFLSSQSAILWMSVLFFMSTIFYWLGMFAGREGSGQSATLESLGSKIAWVAVGMALIGT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
LVRWYESYLIGADIGHIPVSNLYEVFVLFCWMTAAFYLYFEAQYDTRALGAFVMLVVSAA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
VGFLLWYTVVREAHEIQPLVPALKSWWMKLHVPANFIGYGMFSLSAMVSLSYLIKQQAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TRWYKLTPLWLLGVVLCFVPIVFRKSPAEVGGGNYWAGYLLVSGLIAGGILLGRQRIAAR
CCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSFEILDDVMYKAIAVGFAFFTIATVLGALWAAEAWGGYWSWDPKETWALIVWLNYAAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHH
LHMRLMKGLRGTVAAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTPSGYTAAVNTTTLTAGRRSGQDSTLDLNEGYFARRNALDWVFAVLVLAGGLYAFARY
CCCCCCCEEEEECEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NAFMDVYEKGILLAAMPAAMAMGWFWRPLRVLMAAVTGFALLGIMSYQGDLARAEQVFWL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KYFLSSQSAILWMSVLFFMSTIFYWLGMFAGREGSGQSATLESLGSKIAWVAVGMALIGT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
LVRWYESYLIGADIGHIPVSNLYEVFVLFCWMTAAFYLYFEAQYDTRALGAFVMLVVSAA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
VGFLLWYTVVREAHEIQPLVPALKSWWMKLHVPANFIGYGMFSLSAMVSLSYLIKQQAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TRWYKLTPLWLLGVVLCFVPIVFRKSPAEVGGGNYWAGYLLVSGLIAGGILLGRQRIAAR
CCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSFEILDDVMYKAIAVGFAFFTIATVLGALWAAEAWGGYWSWDPKETWALIVWLNYAAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHH
LHMRLMKGLRGTVAAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA