Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is htrB [H]
Identifier: 91786670
GI number: 91786670
Start: 788919
End: 789800
Strand: Direct
Name: htrB [H]
Synonym: Bpro_0768
Alternate gene names: 91786670
Gene position: 788919-789800 (Clockwise)
Preceding gene: 91786667
Following gene: 91786671
Centisome position: 15.17
GC content: 67.69
Gene sequence:
>882_bases ATGCGCTGGTTATTCCGTTTCTTCTCCCTCTGGCCGCTGGCGGCCCTGCACGCCCTGGGTGGGCTGCTGGGCTGGCTGGT CTGGGCCCTGAGTCCGCGCTACCGGGCGCAGTTCAGGGCCCATGTGGCACAGGCCGGCCTGCCTTTTGAGGTTGCCCGGC CGGCGATCGCCGAGGCCGGCCGTTTTGTGGCCGAGTTGCCCAAGCTGTGGTTGCGCCCCCCGGGCGAGTCCTGCCTGGGC AATGTCCGTGTGGAGGGGCAGTCCCACGCAACAGAGGGTTTTGCGCGGGGCAAGGGCGTGATCTTCTTCGGCCCCCACTG CGGAAGCTTCGAGCTTGGCCCGCAGGCCCTGGCCGAACTGTACGGGCCGATCACCGCCATTTACCGCCCGGCGCGCAAGC CCTGGCTGGCCCGTCTGGAGCGGCTCGCGCGCGACCGGCCGAATCTCACCGTGATGCCAGCCTCCCTGAGCGGCATTCGC CAGATGCACAGGACCCTGAAGTCCAACCATGCGGTGGCCATGCTGACGGACCAGGTGCCGCCCGAGGGGCTGGGCGTCTG GGCGCCTTTTTTTGGCCGGCCGGCCTACACCATGACGCTGGCTGCCCGGCTGGCGCTGCAAAGCGGTGCCGCACTGCTGC CCGTGAGTTGTGAGCGTTTGCCGCGCGGGCGGGGTTATTGGCTGAAAATCTGGCCACCGGTGGCGGGACTGGATACGCGC GGCACGACCGATGTGTCCCGCGAAGCCGATATGCTGCGTATCGTGACGCTGATCAACCAGGCGATCGAGGCCATCGTGCT GAGCCAGCCTGGGCAGTATTTGTGGGGTTATGCGCGCTACAAGACCCCCCGCCACGAAACACCCCGCAAGGACGCCCTTT GA
Upstream 100 bases:
>100_bases TTTGGTTTAATGTCGCCCTGCAAGTTGTTCAGTAACTCGGCGACCCTTGCATTATAAGACCTTGCGTTTTTGCCTGAAGC CGCTTCCCAACACCCCACAC
Downstream 100 bases:
>100_bases AAACACCCCGTCAGTTAGCCAGCGAATTCACCACCCGCGCGGGCATCGTCTTCATGCAGGTGCTGGCGCTGTTGCCCTTG TCGTGGATTCGCGCGCTGGG
Product: lipid A biosynthesis acyltransferase
Products: NA
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRWLFRFFSLWPLAALHALGGLLGWLVWALSPRYRAQFRAHVAQAGLPFEVARPAIAEAGRFVAELPKLWLRPPGESCLG NVRVEGQSHATEGFARGKGVIFFGPHCGSFELGPQALAELYGPITAIYRPARKPWLARLERLARDRPNLTVMPASLSGIR QMHRTLKSNHAVAMLTDQVPPEGLGVWAPFFGRPAYTMTLAARLALQSGAALLPVSCERLPRGRGYWLKIWPPVAGLDTR GTTDVSREADMLRIVTLINQAIEAIVLSQPGQYLWGYARYKTPRHETPRKDAL
Sequences:
>Translated_293_residues MRWLFRFFSLWPLAALHALGGLLGWLVWALSPRYRAQFRAHVAQAGLPFEVARPAIAEAGRFVAELPKLWLRPPGESCLG NVRVEGQSHATEGFARGKGVIFFGPHCGSFELGPQALAELYGPITAIYRPARKPWLARLERLARDRPNLTVMPASLSGIR QMHRTLKSNHAVAMLTDQVPPEGLGVWAPFFGRPAYTMTLAARLALQSGAALLPVSCERLPRGRGYWLKIWPPVAGLDTR GTTDVSREADMLRIVTLINQAIEAIVLSQPGQYLWGYARYKTPRHETPRKDAL >Mature_293_residues MRWLFRFFSLWPLAALHALGGLLGWLVWALSPRYRAQFRAHVAQAGLPFEVARPAIAEAGRFVAELPKLWLRPPGESCLG NVRVEGQSHATEGFARGKGVIFFGPHCGSFELGPQALAELYGPITAIYRPARKPWLARLERLARDRPNLTVMPASLSGIR QMHRTLKSNHAVAMLTDQVPPEGLGVWAPFFGRPAYTMTLAARLALQSGAALLPVSCERLPRGRGYWLKIWPPVAGLDTR GTTDVSREADMLRIVTLINQAIEAIVLSQPGQYLWGYARYKTPRHETPRKDAL
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA. Has 10 fold selectivity for lauroyl- ACP over myristoyl-ACP [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87082094, Length=200, Percent_Identity=29.5, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 32589; Mature: 32589
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLFRFFSLWPLAALHALGGLLGWLVWALSPRYRAQFRAHVAQAGLPFEVARPAIAEAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RFVAELPKLWLRPPGESCLGNVRVEGQSHATEGFARGKGVIFFGPHCGSFELGPQALAEL HHHHHHHHHHCCCCCHHHHCCEEECCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHH YGPITAIYRPARKPWLARLERLARDRPNLTVMPASLSGIRQMHRTLKSNHAVAMLTDQVP HHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCC PEGLGVWAPFFGRPAYTMTLAARLALQSGAALLPVSCERLPRGRGYWLKIWPPVAGLDTR CCCCEECCHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCEEEEECCCCCCCCCC GTTDVSREADMLRIVTLINQAIEAIVLSQPGQYLWGYARYKTPRHETPRKDAL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRWLFRFFSLWPLAALHALGGLLGWLVWALSPRYRAQFRAHVAQAGLPFEVARPAIAEAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RFVAELPKLWLRPPGESCLGNVRVEGQSHATEGFARGKGVIFFGPHCGSFELGPQALAEL HHHHHHHHHHCCCCCHHHHCCEEECCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHH YGPITAIYRPARKPWLARLERLARDRPNLTVMPASLSGIRQMHRTLKSNHAVAMLTDQVP HHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCC PEGLGVWAPFFGRPAYTMTLAARLALQSGAALLPVSCERLPRGRGYWLKIWPPVAGLDTR CCCCEECCHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCEEEEECCCCCCCCCC GTTDVSREADMLRIVTLINQAIEAIVLSQPGQYLWGYARYKTPRHETPRKDAL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]