Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is msbB [H]

Identifier: 91786671

GI number: 91786671

Start: 789797

End: 790699

Strand: Direct

Name: msbB [H]

Synonym: Bpro_0769

Alternate gene names: 91786671

Gene position: 789797-790699 (Clockwise)

Preceding gene: 91786670

Following gene: 91786674

Centisome position: 15.19

GC content: 63.46

Gene sequence:

>903_bases
TTGAAAACACCCCGTCAGTTAGCCAGCGAATTCACCACCCGCGCGGGCATCGTCTTCATGCAGGTGCTGGCGCTGTTGCC
CTTGTCGTGGATTCGCGCGCTGGGTGTGGTCTTGGGGTGGCTGCTGTATGCCCTGGTGGGCTCGCGCCGGCGGGTGGTGC
AGACCAATTTGTCCCTGTGTTTTCCCGAACGCTCCGAGGCCGAGCGGCGCCAGCTTGCGCAACAGACCTTCATCTATTTT
GCGCAGGCCTGGCTGGACCGCAGCTGGCTGTGGCATGCGCCGCAGGCCTGGGTCCAGCGGCGGGTGCAACTGACCGGAGC
CGTGCAGGAACTGGCAGGCAATGAACCGACGGTGGCTTTTTGCCCGCATTTTGTGGGCATGGATGCTGCGTGGGCGGGCG
TGGCCCTGCAGTTGCAGGTCCCGCGGACATCGACCACGATTTACACGGACCAGTCCAACAAGCTGGTCGATGCGTGGATA
CTGCGTGGCCGCCAGCGCTTTGGCCATCTGCGCCTGTTTGGCCGGGCCGACGGTGTCAAACCCATTGTGGCGGCACTGCG
CGAAGGGCAGCCGCTGTATCTGCTGCCCGACATGGACTTTGGGCCGGACGATTCGGTGTTTGTGCCCTTTTACGGTATTC
CCACGGCGACCGTGCCGTCGCTGCCGCGCTTTGCCAGGCTGGGCCGGGCCAAGGTCTTGTCCATATTGCCGCGCATCACC
GCGGCGGGCTATGAGATCGAGGTGCAGCCCGCCTGGGAAAATTATCCCAGCGATGATCCGGTGGCTGATACCGCCCGGAT
GAATGCCTGCCTGCAGGACTATATTGCCACCATGCCGGCGCAATACTACTGGGTGCACAAGCGCTTCAAGACGCGGCCCG
AGGGCGCGCCTTCGCTGTATTAA

Upstream 100 bases:

>100_bases
AGGCGATCGAGGCCATCGTGCTGAGCCAGCCTGGGCAGTATTTGTGGGGTTATGCGCGCTACAAGACCCCCCGCCACGAA
ACACCCCGCAAGGACGCCCT

Downstream 100 bases:

>100_bases
ACTAGGCCGCGGCTTGGCGGTTTTAGGTGAAATTTGCCTCTGATCCAGGAAATACCGGAGCTTTAAGCTCTAATCAATAG
CAATTCGGCGCAGAAACCTG

Product: lipid A biosynthesis acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKTPRQLASEFTTRAGIVFMQVLALLPLSWIRALGVVLGWLLYALVGSRRRVVQTNLSLCFPERSEAERRQLAQQTFIYF
AQAWLDRSWLWHAPQAWVQRRVQLTGAVQELAGNEPTVAFCPHFVGMDAAWAGVALQLQVPRTSTTIYTDQSNKLVDAWI
LRGRQRFGHLRLFGRADGVKPIVAALREGQPLYLLPDMDFGPDDSVFVPFYGIPTATVPSLPRFARLGRAKVLSILPRIT
AAGYEIEVQPAWENYPSDDPVADTARMNACLQDYIATMPAQYYWVHKRFKTRPEGAPSLY

Sequences:

>Translated_300_residues
MKTPRQLASEFTTRAGIVFMQVLALLPLSWIRALGVVLGWLLYALVGSRRRVVQTNLSLCFPERSEAERRQLAQQTFIYF
AQAWLDRSWLWHAPQAWVQRRVQLTGAVQELAGNEPTVAFCPHFVGMDAAWAGVALQLQVPRTSTTIYTDQSNKLVDAWI
LRGRQRFGHLRLFGRADGVKPIVAALREGQPLYLLPDMDFGPDDSVFVPFYGIPTATVPSLPRFARLGRAKVLSILPRIT
AAGYEIEVQPAWENYPSDDPVADTARMNACLQDYIATMPAQYYWVHKRFKTRPEGAPSLY
>Mature_300_residues
MKTPRQLASEFTTRAGIVFMQVLALLPLSWIRALGVVLGWLLYALVGSRRRVVQTNLSLCFPERSEAERRQLAQQTFIYF
AQAWLDRSWLWHAPQAWVQRRVQLTGAVQELAGNEPTVAFCPHFVGMDAAWAGVALQLQVPRTSTTIYTDQSNKLVDAWI
LRGRQRFGHLRLFGRADGVKPIVAALREGQPLYLLPDMDFGPDDSVFVPFYGIPTATVPSLPRFARLGRAKVLSILPRIT
AAGYEIEVQPAWENYPSDDPVADTARMNACLQDYIATMPAQYYWVHKRFKTRPEGAPSLY

Specific function: Transfers myristate or laurate, activated on ACP, to (KDO)2-(lauroyl)-lipid IVA [H]

COG id: COG1560

COG function: function code M; Lauroyl/myristoyl acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the htrB/msbB family [H]

Homologues:

Organism=Escherichia coli, GI1787292, Length=295, Percent_Identity=30.8474576271186, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788161, Length=285, Percent_Identity=32.9824561403509, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI87082094, Length=281, Percent_Identity=29.5373665480427, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004960
- InterPro:   IPR011921 [H]

Pfam domain/function: PF03279 Lip_A_acyltrans [H]

EC number: 2.3.1.-

Molecular weight: Translated: 33922; Mature: 33922

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPRQLASEFTTRAGIVFMQVLALLPLSWIRALGVVLGWLLYALVGSRRRVVQTNLSLC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEE
FPERSEAERRQLAQQTFIYFAQAWLDRSWLWHAPQAWVQRRVQLTGAVQELAGNEPTVAF
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
CPHFVGMDAAWAGVALQLQVPRTSTTIYTDQSNKLVDAWILRGRQRFGHLRLFGRADGVK
CCHHHCCCCHHCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHH
PIVAALREGQPLYLLPDMDFGPDDSVFVPFYGIPTATVPSLPRFARLGRAKVLSILPRIT
HHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAGYEIEVQPAWENYPSDDPVADTARMNACLQDYIATMPAQYYWVHKRFKTRPEGAPSLY
HCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKTPRQLASEFTTRAGIVFMQVLALLPLSWIRALGVVLGWLLYALVGSRRRVVQTNLSLC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEE
FPERSEAERRQLAQQTFIYFAQAWLDRSWLWHAPQAWVQRRVQLTGAVQELAGNEPTVAF
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
CPHFVGMDAAWAGVALQLQVPRTSTTIYTDQSNKLVDAWILRGRQRFGHLRLFGRADGVK
CCHHHCCCCHHCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHH
PIVAALREGQPLYLLPDMDFGPDDSVFVPFYGIPTATVPSLPRFARLGRAKVLSILPRIT
HHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAGYEIEVQPAWENYPSDDPVADTARMNACLQDYIATMPAQYYWVHKRFKTRPEGAPSLY
HCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Acyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]