| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yhbQ [H]
Identifier: 91212573
GI number: 91212573
Start: 3519801
End: 3520103
Strand: Direct
Name: yhbQ [H]
Synonym: UTI89_C3582
Alternate gene names: 91212573
Gene position: 3519801-3520103 (Clockwise)
Preceding gene: 91212571
Following gene: 91212576
Centisome position: 69.48
GC content: 54.13
Gene sequence:
>303_bases ATGACACCCTGGTTTCTTTACTTGATCCGTACCGCCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCG CTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAGGGAGAACTAACGCTGGCGTTTTCCGCACCAG TGGGCGATCGTTCGCTGGCGTTACGGGCAGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCG GAAGGTGCAGTGTTTGCAGAACTGTTGAGCAGCCTGCAAACCCCGGAGATTAAAAGCGATTGA
Upstream 100 bases:
>100_bases ACAACATGTTGTTTTGCCAGCCAACGGCTGATGGCGGTGAGTGTTTCCATTGCTGTTCTCTTTTATACTGTGGGCCTGAC CTTAACATGCGACGCAGACG
Downstream 100 bases:
>100_bases AGTGCTCGTGATACTCAACCAGACCAGTTACACCGTTCAGCGCGTCATCCGCTAAACGATGTACCTGGAAGGCACTTTCA GTGCCCGGCCAGCGGCAACG
Product: GIY-YIG nuclease superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVA EGAVFAELLSSLQTPEIKSD
Sequences:
>Translated_100_residues MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVA EGAVFAELLSSLQTPEIKSD >Mature_99_residues TPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAE GAVFAELLSSLQTPEIKSD
Specific function: Unknown
COG id: COG2827
COG function: function code L; Predicted endonuclease containing a URI domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0213 family [H]
Homologues:
Organism=Escherichia coli, GI1789545, Length=100, Percent_Identity=98, Blast_Score=199, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022992 - InterPro: IPR000305 [H]
Pfam domain/function: PF01541 GIY-YIG [H]
EC number: NA
Molecular weight: Translated: 11284; Mature: 11153
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLA CCCCEEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCCEE LRAEYRVKQLTKRQKERLVAEGAVFAELLSSLQTPEIKSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLA CCCEEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCCEE LRAEYRVKQLTKRQKERLVAEGAVFAELLSSLQTPEIKSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA