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The map label for this gene is yhbU [H]

Identifier: 91212576

GI number: 91212576

Start: 3521293

End: 3522315

Strand: Direct

Name: yhbU [H]

Synonym: UTI89_C3585

Alternate gene names: 91212576

Gene position: 3521293-3522315 (Clockwise)

Preceding gene: 91212573

Following gene: 91212577

Centisome position: 69.51

GC content: 56.4

Gene sequence:

>1023_bases
TTGATAGCGCAACCTTCAGGAAAAATTATGGAGCTGCTCTGCCCTGCCGGAAATCTCCCGGCGCTTAAGGCGGCCATCGA
AAACGGCGCAGATGCTGTTTATATCGGGCTAAAAGATGATACCAATGCCCGTCACTTCGCCGGCCTTAACTTTACCGAGA
AAAAATTGCAGGAAGCGGTGAGTTTTGTCCATCAACATCGCCGCAAACTTCACATCGCGATTAACACTTTTGCGCATCCG
GACGGTTACGCCCGTTGGCAGCGCGCCGTGGATATGGCGGCGCAACTGGGTGCCGACGCGCTGATACTCGCCGACCTCGC
CATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGG
CGATTAACTTTTATCATCGCCATTTTGACGTTGCCCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAAACAA
CTGGCACGGGTCACACCTGTACCACTGGAAGTCTTTGCTTTCGGCAGCCTGTGCATTATGTCGGAAGGTCGTTGCTATCT
GTCGTCGTATTTGACGGGTGAGTCGCCCAACACCGTGGGCGCGTGTTCTCCGGCCCGTTTCGTGCGCTGGCAACAAACGC
CGCAGGGGCTGGAATCCCGCCTGAACGAAGTGCTGATCGACCGTTATCAGGACGGCGAAAACGCAGGTTATCCGACGCTA
TGTAAAGGGCGTTATCTGGTGAACGGCGAGCGCTATCATGCGCTGGAAGAACCAACCAGTCTCAATACCCTGGAACTGCT
GCCGGAGTTAATGGCGGCGAATATCGCTTCGGTGAAAATTGAAGGCCGCCAGCGTAGCCCGGCGTATGTCAGCCAGGTGG
CGAAAGTCTGGCGTCAGGCTATCGACCGTTGTAAGGCCGATCCGCAAAACTTCATACCGCAAAGCGCGTGGATGGAGACG
CTCGGGTCGATGTCCGAAGGCACGCAGACCACCCTTGGCGCATATCACCGTAAATGGCAGTGA

Upstream 100 bases:

>100_bases
ATGAAATTGCTGCTACCACCAATACAACTTTAACTGCCTTAAATCAAAAATTGTCGCAGCAAGGTTAACTAAAATCCCAG
TTCGTTAACATTTTTGCGTT

Downstream 100 bases:

>100_bases
GAAAAGCAATGAAATATTCCTTAGGGCCAGTGCTGTGGTACTGGCCAAAAGAGACGCTGGAAGAATTTTATCAGCAGGCC
GCCGCCAGCAGCGCCGACGT

Product: putative protease YhbU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MIAQPSGKIMELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHP
DGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQ
LARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTL
CKGRYLVNGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFIPQSAWMET
LGSMSEGTQTTLGAYHRKWQ

Sequences:

>Translated_340_residues
MIAQPSGKIMELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHP
DGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQ
LARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTL
CKGRYLVNGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFIPQSAWMET
LGSMSEGTQTTLGAYHRKWQ
>Mature_340_residues
MIAQPSGKIMELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHP
DGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQ
LARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTL
CKGRYLVNGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFIPQSAWMET
LGSMSEGTQTTLGAYHRKWQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=99.0936555891239, Blast_Score=690, Evalue=0.0,
Organism=Escherichia coli, GI1788397, Length=321, Percent_Identity=28.9719626168224, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87081910, Length=293, Percent_Identity=32.7645051194539, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 37973; Mature: 37973

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQPSGKIMELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAV
CCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHH
SFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIE
HHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH
RHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIM
HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEE
SEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTL
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE
CKGRYLVNGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQA
ECCEEEECCCHHCCCCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHH
IDRCKADPQNFIPQSAWMETLGSMSEGTQTTLGAYHRKWQ
HHHHCCCHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIAQPSGKIMELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAV
CCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHH
SFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIE
HHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH
RHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIM
HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEE
SEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTL
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE
CKGRYLVNGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQA
ECCEEEECCCHHCCCCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHH
IDRCKADPQNFIPQSAWMETLGSMSEGTQTTLGAYHRKWQ
HHHHCCCHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]