Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is trbA [H]
Identifier: 91206371
GI number: 91206371
Start: 94474
End: 94815
Strand: Direct
Name: trbA [H]
Synonym: UTI89_P126
Alternate gene names: 91206371
Gene position: 94474-94815 (Clockwise)
Preceding gene: 91206370
Following gene: 91206373
Centisome position: 82.71
GC content: 38.3
Gene sequence:
>342_bases ATGCATACAGGGGATTTGTGTTTTTTTACAGGTGCCAGCCTGTTTATCGTGGGGGTTGTTGGTTATTTCTTTACAGGACC AAATAATAAAGGAGTTTATCTGCTGAGCTCGTTTATCTTCTTTGTAGTAAATGTCATAAGTGTATGTATGCTGCCAGATA ATTTCTTGTTTCTTTGTGGTGCGGTTATGAATCAGTGTGCCGTACCGGTTGTTTCAATGGCAGTCAGTACCATACCGGTT ATCACGAAGTTTGACAGTTTCAGAAGGATGTTTGTTTGTATTATGTTGTCAGCCATATGGTCTGGAGTGATGTGGTTTTT TATTATTTCATTAGTGAAATGA
Upstream 100 bases:
>100_bases CGCCCGTTATCATACGGCTTTATTTCACAGGACGACCTGGCAAAACAGTTCCTGAACGTTTCTGAAGATTTTAAACCGAA TTTTTAACCAAAGGTTATAT
Downstream 100 bases:
>100_bases CTGGTGCTAATTTGTCATAAATGCCAAATCCAATAGTGAGGTTGATTACCACAGACCAGAGGATAAACCAGACTGCTATC CAGTGACTTCTGAATAACTC
Product: conjugal transfer protein TrbA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MHTGDLCFFTGASLFIVGVVGYFFTGPNNKGVYLLSSFIFFVVNVISVCMLPDNFLFLCGAVMNQCAVPVVSMAVSTIPV ITKFDSFRRMFVCIMLSAIWSGVMWFFIISLVK
Sequences:
>Translated_113_residues MHTGDLCFFTGASLFIVGVVGYFFTGPNNKGVYLLSSFIFFVVNVISVCMLPDNFLFLCGAVMNQCAVPVVSMAVSTIPV ITKFDSFRRMFVCIMLSAIWSGVMWFFIISLVK >Mature_113_residues MHTGDLCFFTGASLFIVGVVGYFFTGPNNKGVYLLSSFIFFVVNVISVCMLPDNFLFLCGAVMNQCAVPVVSMAVSTIPV ITKFDSFRRMFVCIMLSAIWSGVMWFFIISLVK
Specific function: Unknown. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12535; Mature: 12535
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 10.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTGDLCFFTGASLFIVGVVGYFFTGPNNKGVYLLSSFIFFVVNVISVCMLPDNFLFLCG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AVMNQCAVPVVSMAVSTIPVITKFDSFRRMFVCIMLSAIWSGVMWFFIISLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MHTGDLCFFTGASLFIVGVVGYFFTGPNNKGVYLLSSFIFFVVNVISVCMLPDNFLFLCG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AVMNQCAVPVVSMAVSTIPVITKFDSFRRMFVCIMLSAIWSGVMWFFIISLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536655; 7915817 [H]