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The map label for this gene is trbC [H]

Identifier: 91206367

GI number: 91206367

Start: 90955

End: 91593

Strand: Direct

Name: trbC [H]

Synonym: UTI89_P122

Alternate gene names: 91206367

Gene position: 90955-91593 (Clockwise)

Preceding gene: 91206366

Following gene: 91206368

Centisome position: 79.62

GC content: 54.46

Gene sequence:

>639_bases
ATGAACCGGAAAATATTTGCACTTTTTGCTCTGACAGCAGGGATGCATCTTGCTGTTCATGCTTCAGAAAATGTGAACAC
ACCTGAAAACCGCCAGTTCCTGAAGCAGCAGGAAAATTTAAGCAGACAACTGCGAGAGAAACCTGACCATCAGCTGAAAG
CTTGGGCGGAGAAACAGGTGCTGGAAAACCCCCTTCAGCGTTCAGATAACCATTTTCTGGATGAGCTGGTTCGTAAACAG
CAGGCTTCGCAGGACGGGAAACCCCGGCAGGGTGCCCTGTATTTTGTGTCGTTTTCCATTCCCGAAGAGGGGCTTAAACG
GATGCTGGGCGAAACCCGGCACTACGGTATTCCGGCCACACTGCGGGGCATGGTGAACAATGACCTGAAGACCACCGCTG
AAGCCGTGCTGTCCCTGGTGAAAGACGGCGCGACTGATGGTGTTCAGATCGACCCGACGCTGTTTTCACAGTACGGCATT
CGCAGTGTACCGGCACTGGTGGTGTTCTGCAGTCAGGGATACGACATCATCCGGGGAAACCTGCGGGTCGGCCAGGCGCT
GGAGAAAGTGGCCGCCACGGGTGACTGCCGGCAGGTGGCTCATGATTTACTGGCAGGGAAAGGAGATTCCGGGAAATGA

Upstream 100 bases:

>100_bases
ATCTGAAGGTGACATTTACATGTGCGTTTATGGCTGTTTTTCTCAATTATCTTTTTTCTGATGAGTTCATGCCTGTAAAT
AGCAGAAAGTGAGAAATATC

Downstream 100 bases:

>100_bases
AACGTATTTTACCTCTGATACTGGCTCTGGTTGCCGGCATGGCACAGGCTGACAGCAACAGTGATTACCGGGCCGGTTCT
GATTTTGCCCGTCAGATTCA

Product: conjugal transfer pilus assembly protein TrbC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNRKIFALFALTAGMHLAVHASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQ
QASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGI
RSVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGDSGK

Sequences:

>Translated_212_residues
MNRKIFALFALTAGMHLAVHASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQ
QASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGI
RSVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGDSGK
>Mature_212_residues
MNRKIFALFALTAGMHLAVHASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQ
QASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGI
RSVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGDSGK

Specific function: Essential for F plasmid conjugative transfer, participates in F-pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019106
- InterPro:   IPR014113 [H]

Pfam domain/function: PF09673 TrbC_Ftype [H]

EC number: NA

Molecular weight: Translated: 23523; Mature: 23523

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKIFALFALTAGMHLAVHASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQV
CCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPAT
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHH
LRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGIRSVPALVVFCSQGYDIIRGN
HHHHHCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCHHHHHHHHHHHCCCCHHHCCC
LRVGQALEKVAATGDCRQVAHDLLAGKGDSGK
CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRKIFALFALTAGMHLAVHASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQV
CCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPAT
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHH
LRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGIRSVPALVVFCSQGYDIIRGN
HHHHHCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCHHHHHHHHHHHCCCCHHHCCC
LRVGQALEKVAATGDCRQVAHDLLAGKGDSGK
CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2050638; 7915817; 2198250; 1593622 [H]