The gene/protein map for NC_007941 is currently unavailable.
Definition Escherichia coli UTI89 plasmid pUTI89, complete sequence.
Accession NC_007941
Length 114,230

Click here to switch to the map view.

The map label for this gene is traR [H]

Identifier: 91206359

GI number: 91206359

Start: 84628

End: 84849

Strand: Direct

Name: traR [H]

Synonym: UTI89_P114

Alternate gene names: 91206359

Gene position: 84628-84849 (Clockwise)

Preceding gene: 91206358

Following gene: 91206360

Centisome position: 74.09

GC content: 42.79

Gene sequence:

>222_bases
GTGAGTGATGAAGCCGATGAAGCATATTCAGTGACAGAACAACTGACCATGACAGGAATAAACCGTATACGCCAGAAAAT
AAATGTTCATGGTATTCCTGTTTATCTCTGTGAGGCATGCGGAAATCCTATTCCGGAAGCCCGGCGGAAAATATTTCCCG
GTGTGACGTTATGTGTTGAATGTCAGGCGTATCAGGAAAAACAGAGAAAACACTATGCATAA

Upstream 100 bases:

>100_bases
GGCGGGCTTTCTGTATTCAAAATCTGCCTGTAAAACGAGTGCCCTGTGCGTGAAAAGGGATGGGCGGTAGCGTGTCAGAA
CATGTCGGGAGGAATATTCC

Downstream 100 bases:

>100_bases
ATCAGAAGCTGAAAAAATAGATTCTATTCTGGATGAACATCAACAGATATATCGCAGACATAACCAAATAAATAACATCC
TGGCGTATTGTGCGTGTATT

Product: conjugal transfer protein TraR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MSDEADEAYSVTEQLTMTGINRIRQKINVHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQEKQRKHYA

Sequences:

>Translated_73_residues
MSDEADEAYSVTEQLTMTGINRIRQKINVHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQEKQRKHYA
>Mature_72_residues
SDEADEAYSVTEQLTMTGINRIRQKINVHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQEKQRKHYA

Specific function: Unknown. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020460
- InterPro:   IPR012783
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 8314; Mature: 8182

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEADEAYSVTEQLTMTGINRIRQKINVHGIPVYLCEACGNPIPEARRKIFPGVTLCVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCEEEE
CQAYQEKQRKHYA
HHHHHHHHHCCCC
>Mature Secondary Structure 
SDEADEAYSVTEQLTMTGINRIRQKINVHGIPVYLCEACGNPIPEARRKIFPGVTLCVE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCEEEE
CQAYQEKQRKHYA
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8021201; 7915817; 2265751 [H]