Definition Escherichia coli UTI89 plasmid pUTI89, complete sequence.
Accession NC_007941
Length 114,230

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The map label for this gene is yfiA

Identifier: 91206360

GI number: 91206360

Start: 84842

End: 85315

Strand: Direct

Name: yfiA

Synonym: UTI89_P115

Alternate gene names: NA

Gene position: 84842-85315 (Clockwise)

Preceding gene: 91206359

Following gene: 91206361

Centisome position: 74.27

GC content: 45.57

Gene sequence:

>474_bases
ATGCATAAATCAGAAGCTGAAAAAATAGATTCTATTCTGGATGAACATCAACAGATATATCGCAGACATAACCAAATAAA
TAACATCCTGGCGTATTGTGCGTGTATTGCATGGATTCCCTGTATTATTGCTGCGTTCGGCGTTGATGGTATATATCTGA
AAATCCTGTTTGCGGTCCTTGCCTGCTGTGGTGCGGTATGCTTTTTTATTTTCTTCTTCACTCTCCTGCCGGAATCACTC
ATGGTCCTCAGCCGTCAGAGCCTGCTTCAGCTTATGCGTCTGACTGAAGACGTACCGGATGCGAGACAGGAACTGCTTAA
CCGTTTGTTGTCCGGTAAAAAACTGACTGGTCGGGATGAACAGGATATCCGGCGTCTCTGGCAGGAGAAAGTGGATGCAA
TGCAGGAGTCTGCCACCCGTCAGCGTGAACAGGATACTATTCGGAAGTTTACTGAAGGGAATAAATCCGAATGA

Upstream 100 bases:

>100_bases
GCATGCGGAAATCCTATTCCGGAAGCCCGGCGGAAAATATTTCCCGGTGTGACGTTATGTGTTGAATGTCAGGCGTATCA
GGAAAAACAGAGAAAACACT

Downstream 100 bases:

>100_bases
GAATCTGCAGTGTTTTATGACCTCATAAGTTAACTGAAGGGATATTCAGTGATTAATATACAAGCGGAGATAATAAAGAA
TGCATACCTTTATTTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVLACCGAVCFFIFFFTLLPESL
MVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDEQDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE

Sequences:

>Translated_157_residues
MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVLACCGAVCFFIFFFTLLPESL
MVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDEQDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE
>Mature_157_residues
MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVLACCGAVCFFIFFFTLLPESL
MVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDEQDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18196; Mature: 18196

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ACCGAVCFFIFFFTLLPESLMVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
QDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ACCGAVCFFIFFFTLLPESLMVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
QDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA