Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is yfiA
Identifier: 91206360
GI number: 91206360
Start: 84842
End: 85315
Strand: Direct
Name: yfiA
Synonym: UTI89_P115
Alternate gene names: NA
Gene position: 84842-85315 (Clockwise)
Preceding gene: 91206359
Following gene: 91206361
Centisome position: 74.27
GC content: 45.57
Gene sequence:
>474_bases ATGCATAAATCAGAAGCTGAAAAAATAGATTCTATTCTGGATGAACATCAACAGATATATCGCAGACATAACCAAATAAA TAACATCCTGGCGTATTGTGCGTGTATTGCATGGATTCCCTGTATTATTGCTGCGTTCGGCGTTGATGGTATATATCTGA AAATCCTGTTTGCGGTCCTTGCCTGCTGTGGTGCGGTATGCTTTTTTATTTTCTTCTTCACTCTCCTGCCGGAATCACTC ATGGTCCTCAGCCGTCAGAGCCTGCTTCAGCTTATGCGTCTGACTGAAGACGTACCGGATGCGAGACAGGAACTGCTTAA CCGTTTGTTGTCCGGTAAAAAACTGACTGGTCGGGATGAACAGGATATCCGGCGTCTCTGGCAGGAGAAAGTGGATGCAA TGCAGGAGTCTGCCACCCGTCAGCGTGAACAGGATACTATTCGGAAGTTTACTGAAGGGAATAAATCCGAATGA
Upstream 100 bases:
>100_bases GCATGCGGAAATCCTATTCCGGAAGCCCGGCGGAAAATATTTCCCGGTGTGACGTTATGTGTTGAATGTCAGGCGTATCA GGAAAAACAGAGAAAACACT
Downstream 100 bases:
>100_bases GAATCTGCAGTGTTTTATGACCTCATAAGTTAACTGAAGGGATATTCAGTGATTAATATACAAGCGGAGATAATAAAGAA TGCATACCTTTATTTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Conjugative Transfer Protein
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVLACCGAVCFFIFFFTLLPESL MVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDEQDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE
Sequences:
>Translated_157_residues MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVLACCGAVCFFIFFFTLLPESL MVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDEQDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE >Mature_157_residues MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVLACCGAVCFFIFFFTLLPESL MVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDEQDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18196; Mature: 18196
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ACCGAVCFFIFFFTLLPESLMVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH QDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHKSEAEKIDSILDEHQQIYRRHNQINNILAYCACIAWIPCIIAAFGVDGIYLKILFAVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ACCGAVCFFIFFFTLLPESLMVLSRQSLLQLMRLTEDVPDARQELLNRLLSGKKLTGRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH QDIRRLWQEKVDAMQESATRQREQDTIRKFTEGNKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA