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The map label for this gene is 89885885

Identifier: 89885885

GI number: 89885885

Start: 163577

End: 164833

Strand: Reverse

Name: 89885885

Synonym: Rfer_4399

Alternate gene names: NA

Gene position: 164833-163577 (Counterclockwise)

Preceding gene: 89885886

Following gene: 89885884

Centisome position: 64.03

GC content: 54.65

Gene sequence:

>1257_bases
ATGATCAACCCTCAGAGTCAGCAAGTGTGGGCGGCACCCCGCAGACAACTTTTGCGCTGGACCATTTCGTACGCTCCATG
GAACAGCCCGAAGACCGTCGTCACAGAAAAGACCATTGCCGCATCACAACGAGAAGCGTTGCAGTCCGCCATGAAACTGG
GTGTGCCGCTTTCGGCCAAACGCGACTGGCAATTTGGCTGGCAGAAGATAGACAAAGATTACCGGCAGCAATTCTTGCTG
GCGTTGTCGTTCAACGTCCAGTCCGGCATGTCTGCAGGCAAGGCGTTGGAAGAGGTCATCCAGTCCGAACGCGGCCATGT
GCGACAAGTGATGGAACCCGCGCTGGCAATCATCAAGGCGGGAGGCGAGTTCTCCGATGCGATCGATGGCCTGGCCATGT
TTGATGATGCGACGCTCTCCATCTTGCGCGCTGGTGAAAAGCTCGGGGCAATGAAAGAGGCCATGGCCAGCGCTATCGCT
CATATCAAGAAGACCAATCACTCGATGAAACTGATGATTGGCGCGTTGATGGTCATTATTGCGGACATTGTGGTGTCCTC
CATAACGGTGTTCGGCGTCCAGTTCTATCAGTTGCCGCAACTGCGGACCGAAGGCATCACGTCAAAAGACCCGGTCGTCG
TTGCCAATTTCGCCAGCAACCTTGATATGGCTTTCTTGTTGAATGGAATTTTGACTGCCTTTACTGTGGTGCTCTCCATC
GTGGTGACAGTGGTCGTCATGTCGTATTCAAACAAGGAAATGCGCGAGTTCAGGCAGAAAGTCGACTACGCACTGCATCA
AATGCCGATTCTGCGCGATTTGCTTCGGCACACCGCGATTTCGTCCACCATGTCGATTTGCGGTGCCTTGCTGAGCGGGG
GTGTGATGCTCAATAAAGCGTTGGTCATTGTGCGCGGCTCCACCATGTCACCCATCGTTTCAGGCTACTGGCAAAGGGCC
GAGTCGCATCTCGAGCATGGGGAATCGGTGAACATTGCCCTGCAGGATGAAAACGTGCTTGAACGCTCGGAATGTCTGAT
TCTCGCCTCACACGCAGACCAGATGCAATTGGCGCAGGCCATGCTTGCGATAAGCGAGCGTCGGGACGAGATGGCGGAAC
GGGCATCCAGCAAGTTCGGTAAGTTTGCATTTTGGACCGGGCTACTTTACTCAGGCTGTGGCGTGTTGATCGCCTTGTGG
GTGTCCTACATCCAGTACCAGGCAGTGATGGCCAGCACAACGTCAATCGGGGGATAA

Upstream 100 bases:

>100_bases
GTGTGAAACACATTGCCCGCACGGATACCCTGCGCACGCTGGTTTCATCCGGTGTGATTCCTCTGGGGTTTGCAGCGCTT
CAAATGGGGGTATCAGCATC

Downstream 100 bases:

>100_bases
ATGAAGTCAATAATGAACCTGATCAATTCCAATTCGGGCGCCACAGGGCCGGTCGGCTCAATGCAAACCGAATTGTCACC
AATAGCGCAAGAGGCAATTT

Product: type II secretion system protein

Products: NA

Alternate protein names: Type II Secretion System Protein

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MINPQSQQVWAAPRRQLLRWTISYAPWNSPKTVVTEKTIAASQREALQSAMKLGVPLSAKRDWQFGWQKIDKDYRQQFLL
ALSFNVQSGMSAGKALEEVIQSERGHVRQVMEPALAIIKAGGEFSDAIDGLAMFDDATLSILRAGEKLGAMKEAMASAIA
HIKKTNHSMKLMIGALMVIIADIVVSSITVFGVQFYQLPQLRTEGITSKDPVVVANFASNLDMAFLLNGILTAFTVVLSI
VVTVVVMSYSNKEMREFRQKVDYALHQMPILRDLLRHTAISSTMSICGALLSGGVMLNKALVIVRGSTMSPIVSGYWQRA
ESHLEHGESVNIALQDENVLERSECLILASHADQMQLAQAMLAISERRDEMAERASSKFGKFAFWTGLLYSGCGVLIALW
VSYIQYQAVMASTTSIGG

Sequences:

>Translated_418_residues
MINPQSQQVWAAPRRQLLRWTISYAPWNSPKTVVTEKTIAASQREALQSAMKLGVPLSAKRDWQFGWQKIDKDYRQQFLL
ALSFNVQSGMSAGKALEEVIQSERGHVRQVMEPALAIIKAGGEFSDAIDGLAMFDDATLSILRAGEKLGAMKEAMASAIA
HIKKTNHSMKLMIGALMVIIADIVVSSITVFGVQFYQLPQLRTEGITSKDPVVVANFASNLDMAFLLNGILTAFTVVLSI
VVTVVVMSYSNKEMREFRQKVDYALHQMPILRDLLRHTAISSTMSICGALLSGGVMLNKALVIVRGSTMSPIVSGYWQRA
ESHLEHGESVNIALQDENVLERSECLILASHADQMQLAQAMLAISERRDEMAERASSKFGKFAFWTGLLYSGCGVLIALW
VSYIQYQAVMASTTSIGG
>Mature_418_residues
MINPQSQQVWAAPRRQLLRWTISYAPWNSPKTVVTEKTIAASQREALQSAMKLGVPLSAKRDWQFGWQKIDKDYRQQFLL
ALSFNVQSGMSAGKALEEVIQSERGHVRQVMEPALAIIKAGGEFSDAIDGLAMFDDATLSILRAGEKLGAMKEAMASAIA
HIKKTNHSMKLMIGALMVIIADIVVSSITVFGVQFYQLPQLRTEGITSKDPVVVANFASNLDMAFLLNGILTAFTVVLSI
VVTVVVMSYSNKEMREFRQKVDYALHQMPILRDLLRHTAISSTMSICGALLSGGVMLNKALVIVRGSTMSPIVSGYWQRA
ESHLEHGESVNIALQDENVLERSECLILASHADQMQLAQAMLAISERRDEMAERASSKFGKFAFWTGLLYSGCGVLIALW
VSYIQYQAVMASTTSIGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46013; Mature: 46013

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPQSQQVWAAPRRQLLRWTISYAPWNSPKTVVTEKTIAASQREALQSAMKLGVPLSAK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCC
RDWQFGWQKIDKDYRQQFLLALSFNVQSGMSAGKALEEVIQSERGHVRQVMEPALAIIKA
CCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGEFSDAIDGLAMFDDATLSILRAGEKLGAMKEAMASAIAHIKKTNHSMKLMIGALMVII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ADIVVSSITVFGVQFYQLPQLRTEGITSKDPVVVANFASNLDMAFLLNGILTAFTVVLSI
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VVTVVVMSYSNKEMREFRQKVDYALHQMPILRDLLRHTAISSTMSICGALLSGGVMLNKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCE
LVIVRGSTMSPIVSGYWQRAESHLEHGESVNIALQDENVLERSECLILASHADQMQLAQA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCEEEEECCCHHHHHHHH
MLAISERRDEMAERASSKFGKFAFWTGLLYSGCGVLIALWVSYIQYQAVMASTTSIGG
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINPQSQQVWAAPRRQLLRWTISYAPWNSPKTVVTEKTIAASQREALQSAMKLGVPLSAK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCC
RDWQFGWQKIDKDYRQQFLLALSFNVQSGMSAGKALEEVIQSERGHVRQVMEPALAIIKA
CCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGEFSDAIDGLAMFDDATLSILRAGEKLGAMKEAMASAIAHIKKTNHSMKLMIGALMVII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ADIVVSSITVFGVQFYQLPQLRTEGITSKDPVVVANFASNLDMAFLLNGILTAFTVVLSI
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VVTVVVMSYSNKEMREFRQKVDYALHQMPILRDLLRHTAISSTMSICGALLSGGVMLNKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCE
LVIVRGSTMSPIVSGYWQRAESHLEHGESVNIALQDENVLERSECLILASHADQMQLAQA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCEEEEECCCHHHHHHHH
MLAISERRDEMAERASSKFGKFAFWTGLLYSGCGVLIALWVSYIQYQAVMASTTSIGG
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA