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The map label for this gene is 89885880

Identifier: 89885880

GI number: 89885880

Start: 159939

End: 160436

Strand: Reverse

Name: 89885880

Synonym: Rfer_4394

Alternate gene names: NA

Gene position: 160436-159939 (Counterclockwise)

Preceding gene: 89885881

Following gene: 89885879

Centisome position: 62.32

GC content: 53.21

Gene sequence:

>498_bases
ATGAGTGCGTCCATGATTCTCAAAGAGTCGTCGGACATTCGAGATGGCTTTGCCCGCGCATTCTCAGATGGCATCAGTCC
ATCGGCGCTCACGTTTGACATGGCGGCAAATACCGGATTGTTTCAGCCAAGCAGAGGGTACGCGGTGCAGCAGACGGCAC
CGATCCGTGCCATGGATCCCACGGGGACTCCGGCAAACTTTGTTTGGACCTACAACAAGTTGGTGAAAATAAATGGCATT
GGCATCGATGCCATTGATGATTCAGTGATCTCGATCGGGGACCTGACAGGTGATGTTTGCAGAAGCATCAACAACATGCT
CTACAACACCGACGTTTCTGCGACGCCCATGAATGGGGTCGGTTCTTTGGCCGATTTCGCCGGGGCCGGTGCGATCGACA
TGAGTTCGAATTTACCGGGGCGAGACGGCAAAACCGATCTGTGCGTCACGACCAGCGATGGAAAGTACGTGTACTTCAAA
GTGGTGGTGGAAAAATGA

Upstream 100 bases:

>100_bases
TCTGATCATGTTTGGGATCGCGTTGGCGGTTGCCATCATGGCGGCGTGGGCTATCGCCAATCGCAGCTCGAGTTCCAGTT
CTAACCAGGAGCAGGTAAAA

Downstream 100 bases:

>100_bases
TGCCACGCAGACGCCTCACTTCAGCGCTTGATGGAAAGCAAAAGGGCTTCATGCTGGCTTATGTCATGCTGATGATTGCT
GTAGTCTCAATAGCCATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSASMILKESSDIRDGFARAFSDGISPSALTFDMAANTGLFQPSRGYAVQQTAPIRAMDPTGTPANFVWTYNKLVKINGI
GIDAIDDSVISIGDLTGDVCRSINNMLYNTDVSATPMNGVGSLADFAGAGAIDMSSNLPGRDGKTDLCVTTSDGKYVYFK
VVVEK

Sequences:

>Translated_165_residues
MSASMILKESSDIRDGFARAFSDGISPSALTFDMAANTGLFQPSRGYAVQQTAPIRAMDPTGTPANFVWTYNKLVKINGI
GIDAIDDSVISIGDLTGDVCRSINNMLYNTDVSATPMNGVGSLADFAGAGAIDMSSNLPGRDGKTDLCVTTSDGKYVYFK
VVVEK
>Mature_164_residues
SASMILKESSDIRDGFARAFSDGISPSALTFDMAANTGLFQPSRGYAVQQTAPIRAMDPTGTPANFVWTYNKLVKINGIG
IDAIDDSVISIGDLTGDVCRSINNMLYNTDVSATPMNGVGSLADFAGAGAIDMSSNLPGRDGKTDLCVTTSDGKYVYFKV
VVEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17423; Mature: 17292

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASMILKESSDIRDGFARAFSDGISPSALTFDMAANTGLFQPSRGYAVQQTAPIRAMDP
CCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECC
TGTPANFVWTYNKLVKINGIGIDAIDDSVISIGDLTGDVCRSINNMLYNTDVSATPMNGV
CCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHEECCCCCCCCCCCC
GSLADFAGAGAIDMSSNLPGRDGKTDLCVTTSDGKYVYFKVVVEK
CCHHHHCCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEEC
>Mature Secondary Structure 
SASMILKESSDIRDGFARAFSDGISPSALTFDMAANTGLFQPSRGYAVQQTAPIRAMDP
CCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECC
TGTPANFVWTYNKLVKINGIGIDAIDDSVISIGDLTGDVCRSINNMLYNTDVSATPMNGV
CCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHEECCCCCCCCCCCC
GSLADFAGAGAIDMSSNLPGRDGKTDLCVTTSDGKYVYFKVVVEK
CCHHHHCCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA