Click here to switch to the map view.

The map label for this gene is 89885881

Identifier: 89885881

GI number: 89885881

Start: 160647

End: 161294

Strand: Reverse

Name: 89885881

Synonym: Rfer_4395

Alternate gene names: NA

Gene position: 161294-160647 (Counterclockwise)

Preceding gene: 89885882

Following gene: 89885880

Centisome position: 62.65

GC content: 51.7

Gene sequence:

>648_bases
ATGAAACGTAGCAACTTTAAGAGCAAGCAAGCGGGCTTCATGAACGCCCTGATCATGTTCGGCATCGCGTTGATCGTAGC
GATGATGGGGGCATGGGCAGTTGCCAATCGCAGCTCCAACACCAACTCCAGTACGGAACAGAACAAGATGAGCGCGTCGG
TTATCTTGAAGGAGGCATCCGATTTTAGAGATGGATTTGCGCGTGCGCTGTCTGATGGGATCAGTCCGTCAACAATCACT
TTCGATATGACAGCGGGCACTGGCTTGCTCCAGCCGTCCAAGGGCTATGCATCGCCACAGACAGCCCCGATCCGTGCGAT
GGACGCTGCGGGCACCGCGGCAAACTTTGTCTGGAACTACACCAAATTGGTGAAGATCAAAGATATTGGAGCGGACACCA
GTAATGACTACATGGTGACGCTTGGTGATCTTTCGCTTGAAGTATGCCAACGCCTGAACAACATGCTTTACAACACTGAT
ATGGCTACAGTCCCTGTGACGGGCGTCGGCACTTTGGCAGATTACACGACCACCCCAGCGGCGGTTGATCTAACAACAAG
TGTGGCTGGCCGTGATGGAAAGACAGACCTATGCGTTAAAACCAGCGATGGCAAGTATGTGTATTACAAAGTGATGGTGG
AAAACTAA

Upstream 100 bases:

>100_bases
GTGTTGGCGAGAAGCTGCAGCAGCTACGCAAAGGCGCCAAGATTGAACTCAAATCTTAGTTTTTTCAAATCACAGGTTAA
CCAAGAAGAGGAATATTGAA

Downstream 100 bases:

>100_bases
TCATTCCGCGACGGCGGCTTTTGCCGCCTGTTCTCTCTGGCATCTTCTCACCAGAGCACCAGCGAACACACCATGCACTC
GGTATCTCACCAAAAAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKRSNFKSKQAGFMNALIMFGIALIVAMMGAWAVANRSSNTNSSTEQNKMSASVILKEASDFRDGFARALSDGISPSTIT
FDMTAGTGLLQPSKGYASPQTAPIRAMDAAGTAANFVWNYTKLVKIKDIGADTSNDYMVTLGDLSLEVCQRLNNMLYNTD
MATVPVTGVGTLADYTTTPAAVDLTTSVAGRDGKTDLCVKTSDGKYVYYKVMVEN

Sequences:

>Translated_215_residues
MKRSNFKSKQAGFMNALIMFGIALIVAMMGAWAVANRSSNTNSSTEQNKMSASVILKEASDFRDGFARALSDGISPSTIT
FDMTAGTGLLQPSKGYASPQTAPIRAMDAAGTAANFVWNYTKLVKIKDIGADTSNDYMVTLGDLSLEVCQRLNNMLYNTD
MATVPVTGVGTLADYTTTPAAVDLTTSVAGRDGKTDLCVKTSDGKYVYYKVMVEN
>Mature_215_residues
MKRSNFKSKQAGFMNALIMFGIALIVAMMGAWAVANRSSNTNSSTEQNKMSASVILKEASDFRDGFARALSDGISPSTIT
FDMTAGTGLLQPSKGYASPQTAPIRAMDAAGTAANFVWNYTKLVKIKDIGADTSNDYMVTLGDLSLEVCQRLNNMLYNTD
MATVPVTGVGTLADYTTTPAAVDLTTSVAGRDGKTDLCVKTSDGKYVYYKVMVEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22999; Mature: 22999

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSNFKSKQAGFMNALIMFGIALIVAMMGAWAVANRSSNTNSSTEQNKMSASVILKEAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
DFRDGFARALSDGISPSTITFDMTAGTGLLQPSKGYASPQTAPIRAMDAAGTAANFVWNY
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEECC
TKLVKIKDIGADTSNDYMVTLGDLSLEVCQRLNNMLYNTDMATVPVTGVGTLADYTTTPA
EEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCC
AVDLTTSVAGRDGKTDLCVKTSDGKYVYYKVMVEN
EEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MKRSNFKSKQAGFMNALIMFGIALIVAMMGAWAVANRSSNTNSSTEQNKMSASVILKEAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
DFRDGFARALSDGISPSTITFDMTAGTGLLQPSKGYASPQTAPIRAMDAAGTAANFVWNY
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHEECC
TKLVKIKDIGADTSNDYMVTLGDLSLEVCQRLNNMLYNTDMATVPVTGVGTLADYTTTPA
EEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCC
AVDLTTSVAGRDGKTDLCVKTSDGKYVYYKVMVEN
EEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA