Definition | Rhodoferax ferrireducens T118 plasmid1, complete sequence. |
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Accession | NC_007901 |
Length | 257,447 |
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The map label for this gene is 89885786
Identifier: 89885786
GI number: 89885786
Start: 66731
End: 66970
Strand: Reverse
Name: 89885786
Synonym: Rfer_4300
Alternate gene names: NA
Gene position: 66970-66731 (Counterclockwise)
Preceding gene: 89885798
Following gene: 89885785
Centisome position: 26.01
GC content: 60.0
Gene sequence:
>240_bases ATGTGCTCGTCGCTCATGAAGCCACATTCAGGCATTGGCGCGGTGTCTGGGAGGCTGGCCGCAGCCGGTGGTCGGGCCGG TTGGTTCTCTGGTATTGCAACCGTGGCCTCGACAGGTGCAGAGACATTGGTTTTCTGGGGTTTAGGGGTCTTGGTGGTGT TGGACGCCTTGCGGCGCTTCACCGTTTTGGGTGCAGCGGGGGGTACAACTGGCTTTGGTGGTTCGGGAACCACCAAATGA
Upstream 100 bases:
>100_bases TTCGCCGCAAGACGCCCAAGGTAACGCGCTTCGTCTGCTCATCCGACATGGGGGAGGCTCTCATACCTGCTCCGTGTCGA AATAGCTGACCAAGTTATTC
Downstream 100 bases:
>100_bases GAAGCGCCACGAGCCGTTCGCACCCCAAAGAAGTTGGAGACGATCATGTTTTTTTCTGGACAACAAAGTCCATCCGTAAA GCGGCATAAGACCGCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MCSSLMKPHSGIGAVSGRLAAAGGRAGWFSGIATVASTGAETLVFWGLGVLVVLDALRRFTVLGAAGGTTGFGGSGTTK
Sequences:
>Translated_79_residues MCSSLMKPHSGIGAVSGRLAAAGGRAGWFSGIATVASTGAETLVFWGLGVLVVLDALRRFTVLGAAGGTTGFGGSGTTK >Mature_79_residues MCSSLMKPHSGIGAVSGRLAAAGGRAGWFSGIATVASTGAETLVFWGLGVLVVLDALRRFTVLGAAGGTTGFGGSGTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7700; Mature: 7700
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSSLMKPHSGIGAVSGRLAAAGGRAGWFSGIATVASTGAETLVFWGLGVLVVLDALRRF CCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TVLGAAGGTTGFGGSGTTK HHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MCSSLMKPHSGIGAVSGRLAAAGGRAGWFSGIATVASTGAETLVFWGLGVLVVLDALRRF CCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TVLGAAGGTTGFGGSGTTK HHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA