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The map label for this gene is 89885759

Identifier: 89885759

GI number: 89885759

Start: 28279

End: 28818

Strand: Reverse

Name: 89885759

Synonym: Rfer_4272

Alternate gene names: NA

Gene position: 28818-28279 (Counterclockwise)

Preceding gene: 89885760

Following gene: 89885758

Centisome position: 11.19

GC content: 55.74

Gene sequence:

>540_bases
ATGTTCAATTTTCAAAAGCGTATGTTTGTGGTGTTCGGCATTTTGGTCGTGATGTTGCTCGACAGTATGGCCGGCAATGC
ACACGCCCAGTCTTGGGGACAGGCGGACATCCCATCGTCACAAGGCCGAATGGCTATGAACGTAATGACCGGACGGGTTC
TTGATGTGCAAGCAACTGACATCGAGGTCGTGGCGACCAATCAAAACCGCGCATTTGGCGGTTTGATTGGTGGTCTGCTC
GGAGCCGCTGCAGCCCGCAACGGAAGCTGGCAAGGCCAAGCAGCTGTTGGTTCTATTGGTGCCTTTTTAGGCGAGAAGAT
TGCCAACAATTCAGGCACAGAAATGCGCCCTGCGATGCAGGTCATTGTCCGACTGGACAGCGGCCAGGTCATTGCGGTCG
TGCAAGAGATGAATGGCATTCCCGTGGGCGCGGGTGATGCCGTCTTCGTGGTCGGTTCATACCCGGCCGTGCGCGTTCTG
AGGGCCAATCCCATGGCCTCTATGAACGCAAGCCCGCAGCCGTCTTTTTATCAACCCTGA

Upstream 100 bases:

>100_bases
GCGGCATATCAAAGTCGAGGTACTTATTACCTCATTTCAACCCAGACGGGGCTCATATCCCGTCAGGGCAGAGCTTCGTC
ATTTTTCCAAAGGAAAAGTG

Downstream 100 bases:

>100_bases
GGAGTAACCGTGAATCAGCGAAAGGCTGAAGACATCGCAAATGGTAATTGGGAAGACATTCTCGTTGCCGCTGGACTGGA
CCGATCGTACCTAAAGTACG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MFNFQKRMFVVFGILVVMLLDSMAGNAHAQSWGQADIPSSQGRMAMNVMTGRVLDVQATDIEVVATNQNRAFGGLIGGLL
GAAAARNGSWQGQAAVGSIGAFLGEKIANNSGTEMRPAMQVIVRLDSGQVIAVVQEMNGIPVGAGDAVFVVGSYPAVRVL
RANPMASMNASPQPSFYQP

Sequences:

>Translated_179_residues
MFNFQKRMFVVFGILVVMLLDSMAGNAHAQSWGQADIPSSQGRMAMNVMTGRVLDVQATDIEVVATNQNRAFGGLIGGLL
GAAAARNGSWQGQAAVGSIGAFLGEKIANNSGTEMRPAMQVIVRLDSGQVIAVVQEMNGIPVGAGDAVFVVGSYPAVRVL
RANPMASMNASPQPSFYQP
>Mature_179_residues
MFNFQKRMFVVFGILVVMLLDSMAGNAHAQSWGQADIPSSQGRMAMNVMTGRVLDVQATDIEVVATNQNRAFGGLIGGLL
GAAAARNGSWQGQAAVGSIGAFLGEKIANNSGTEMRPAMQVIVRLDSGQVIAVVQEMNGIPVGAGDAVFVVGSYPAVRVL
RANPMASMNASPQPSFYQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18758; Mature: 18758

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFQKRMFVVFGILVVMLLDSMAGNAHAQSWGQADIPSSQGRMAMNVMTGRVLDVQATD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECC
IEVVATNQNRAFGGLIGGLLGAAAARNGSWQGQAAVGSIGAFLGEKIANNSGTEMRPAMQ
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
VIVRLDSGQVIAVVQEMNGIPVGAGDAVFVVGSYPAVRVLRANPMASMNASPQPSFYQP
EEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFNFQKRMFVVFGILVVMLLDSMAGNAHAQSWGQADIPSSQGRMAMNVMTGRVLDVQATD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECC
IEVVATNQNRAFGGLIGGLLGAAAARNGSWQGQAAVGSIGAFLGEKIANNSGTEMRPAMQ
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
VIVRLDSGQVIAVVQEMNGIPVGAGDAVFVVGSYPAVRVLRANPMASMNASPQPSFYQP
EEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA