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The map label for this gene is 89885760

Identifier: 89885760

GI number: 89885760

Start: 29054

End: 30907

Strand: Reverse

Name: 89885760

Synonym: Rfer_4273

Alternate gene names: NA

Gene position: 30907-29054 (Counterclockwise)

Preceding gene: 89885761

Following gene: 89885759

Centisome position: 12.01

GC content: 56.9

Gene sequence:

>1854_bases
ATGCAACACAATCTGACATCGATCATGTTGGCCGTGGCGGGAGCCATGGCCAACAAGAGCGGGATTGAGCTGGTGATTGA
CCCGCAGGCCACGACGTTCTCGACGGATGGTAGGCGGCTCAAGATCCCTCCGATTGCCAAGCTGACCGAATGGTTTCCGT
GTATTGATGACCTGGAGACATACATCATCGGGGCTGTGGTCCACGAGGCGGGGCACATCCGGTTCACGGACCGTACTTTG
CGCGTGGGCTTCAAAAAGAGCTTCACGGGGCACGCCAAATACAAAATGGCTGACGTCGTGGGCCAATGTATGGAGGACGT
TGCGATCGAGCGCACGCAGTGCAATGCACTGCCTGGCGCGCGTCCAGCGCTCACAAAACTGTGGAAGCTGTTGTACGACG
GTCATTCATCCGAGGAGGCTCACGCTCAGGCGGACGCAGTGTTCACCCACTATGTGTTCTTCAGGGCGCGTCATAGCGTC
CTAAAGACCGAGTGGACTCTCGCTGCATGTGAAACAGCCGCCATCCGGTTGGCTTCGACATTCACACATGATCAGATCAC
GCTGCTGGAAAATGAATTGGCAGTCCTTGATCTGGTTTCATCGACCGCCGATGCGGTAGCGCTCTCCTTGAGGCTGCTGC
GCCTGGTGGGGGTCGAGCCCGTGTCAGTTCAGGACGATGAAGATCAGCCTGAGTCTGACGCCAACAAAGGACCGGACCAG
CAGCCCCAGGGGGGCGCTTCAAAGCCTGCTGATAGCCCAGAACATGCTGAGCGAGGGCAGGGCGACCACGCTAACCAGGA
ATCCACCCCATGCGCGGGCGCTGAAACTGCCACGGACGGGCCGGACAAGCCCGAAAGTGAGGATGATGAAGCCGAGGGCG
CAACGGGCCCGAGCGGTCAAACAGAGCCAGGCAATGAATCGGGCAGGGGAGAACCGCTTGATGCAGTTGCGGGGGAAGAA
ACGCAAGTCAGTGCAGGGGCAGGCGGCCTTGCAGAAGTGGACCCATTGGAGTTGATCTCCATGGCGGTACAAGAGCTGCA
GGAAGAGTTGCCAGAGGCCACCGAGTACGAGTTCGTGATGCCGGGCCTGATACCAGGCAGCAGTTTGGCAAGCGTGGAGT
TTGAAGAGAAACACCGAGGGGGGATGGAGCTGCGTTCCAAGATACTGGTGCATACGATGATGGCCAGTGCCCGACTTTCC
ACGTTGCTCAAGGCCCAAACCGAGAGCAAAACAGAATTCTGCAAACGCGGGAAAATCGTTCCGTCCCGGCTGTGGAAGTT
GCAGGCCGGCAGTACACGGGTATTTCGGCATACCGTGGAGGGCAAGGATCTCAATACGGCCATTAAAGTCCTGCTGGATC
GAAGTCTCTCCATGAAAAAGACCATGAAAAGGGCTATTGAAGCCGCATGCTTCTTGCCGATGGCTTTTGATGATGTCAGC
GGCATCAGCACCAGCATTGACATATTTCCAGGCACCCTGCGGGCCGCTGAGTCACTCAAACGTTTTGGCGAGCGCACCAT
GCCTTGCCTGGATGCATTGGCTTCGGTTCGTGCAAAGGGGGGGACACCATTGGGTGCGGCCCTTGAAATCAGTGGCATGG
AATTGGTCCAGTTCAATGCAGAGCGACGCCTGTTGGTGGTGATCACAGATGGAGCGCCTGACAGGCTCAATGAAGCGAAG
GCACAACTCAGGGCCCTCGAATCTGCCGATGTCGAAGTTATCGGCATTGGCATTGGTGTGTCACTCAAGCATCTGTTTAC
CGACTTTGTGTCGGTTAATCAGGTGGGGGAGTTGACCAATGTCCTTTATCATCTGATGGAGAGAAAACTAATCCGACTGC
CCTTGGCAGCCTGA

Upstream 100 bases:

>100_bases
TTGTCGCAAAAATCCGCGAGGAGGTGACCGGCGTAAGAATTCAAAACAAGCCAGCGCAACGCCCAACGGCGGTTGAGCCG
CTGGACTTCTAGGGGCCAAT

Downstream 100 bases:

>100_bases
TTGAGGAGAAAGAATTTAGTTTTCTTCATTTGCGCATTTCCCTCCCTTCACGGGGAGGGGATTTGCCAAAGGGCTATTCG
TAGCCCTTTGGCAAATCAGG

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: Plasmid-Related Protein

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MQHNLTSIMLAVAGAMANKSGIELVIDPQATTFSTDGRRLKIPPIAKLTEWFPCIDDLETYIIGAVVHEAGHIRFTDRTL
RVGFKKSFTGHAKYKMADVVGQCMEDVAIERTQCNALPGARPALTKLWKLLYDGHSSEEAHAQADAVFTHYVFFRARHSV
LKTEWTLAACETAAIRLASTFTHDQITLLENELAVLDLVSSTADAVALSLRLLRLVGVEPVSVQDDEDQPESDANKGPDQ
QPQGGASKPADSPEHAERGQGDHANQESTPCAGAETATDGPDKPESEDDEAEGATGPSGQTEPGNESGRGEPLDAVAGEE
TQVSAGAGGLAEVDPLELISMAVQELQEELPEATEYEFVMPGLIPGSSLASVEFEEKHRGGMELRSKILVHTMMASARLS
TLLKAQTESKTEFCKRGKIVPSRLWKLQAGSTRVFRHTVEGKDLNTAIKVLLDRSLSMKKTMKRAIEAACFLPMAFDDVS
GISTSIDIFPGTLRAAESLKRFGERTMPCLDALASVRAKGGTPLGAALEISGMELVQFNAERRLLVVITDGAPDRLNEAK
AQLRALESADVEVIGIGIGVSLKHLFTDFVSVNQVGELTNVLYHLMERKLIRLPLAA

Sequences:

>Translated_617_residues
MQHNLTSIMLAVAGAMANKSGIELVIDPQATTFSTDGRRLKIPPIAKLTEWFPCIDDLETYIIGAVVHEAGHIRFTDRTL
RVGFKKSFTGHAKYKMADVVGQCMEDVAIERTQCNALPGARPALTKLWKLLYDGHSSEEAHAQADAVFTHYVFFRARHSV
LKTEWTLAACETAAIRLASTFTHDQITLLENELAVLDLVSSTADAVALSLRLLRLVGVEPVSVQDDEDQPESDANKGPDQ
QPQGGASKPADSPEHAERGQGDHANQESTPCAGAETATDGPDKPESEDDEAEGATGPSGQTEPGNESGRGEPLDAVAGEE
TQVSAGAGGLAEVDPLELISMAVQELQEELPEATEYEFVMPGLIPGSSLASVEFEEKHRGGMELRSKILVHTMMASARLS
TLLKAQTESKTEFCKRGKIVPSRLWKLQAGSTRVFRHTVEGKDLNTAIKVLLDRSLSMKKTMKRAIEAACFLPMAFDDVS
GISTSIDIFPGTLRAAESLKRFGERTMPCLDALASVRAKGGTPLGAALEISGMELVQFNAERRLLVVITDGAPDRLNEAK
AQLRALESADVEVIGIGIGVSLKHLFTDFVSVNQVGELTNVLYHLMERKLIRLPLAA
>Mature_617_residues
MQHNLTSIMLAVAGAMANKSGIELVIDPQATTFSTDGRRLKIPPIAKLTEWFPCIDDLETYIIGAVVHEAGHIRFTDRTL
RVGFKKSFTGHAKYKMADVVGQCMEDVAIERTQCNALPGARPALTKLWKLLYDGHSSEEAHAQADAVFTHYVFFRARHSV
LKTEWTLAACETAAIRLASTFTHDQITLLENELAVLDLVSSTADAVALSLRLLRLVGVEPVSVQDDEDQPESDANKGPDQ
QPQGGASKPADSPEHAERGQGDHANQESTPCAGAETATDGPDKPESEDDEAEGATGPSGQTEPGNESGRGEPLDAVAGEE
TQVSAGAGGLAEVDPLELISMAVQELQEELPEATEYEFVMPGLIPGSSLASVEFEEKHRGGMELRSKILVHTMMASARLS
TLLKAQTESKTEFCKRGKIVPSRLWKLQAGSTRVFRHTVEGKDLNTAIKVLLDRSLSMKKTMKRAIEAACFLPMAFDDVS
GISTSIDIFPGTLRAAESLKRFGERTMPCLDALASVRAKGGTPLGAALEISGMELVQFNAERRLLVVITDGAPDRLNEAK
AQLRALESADVEVIGIGIGVSLKHLFTDFVSVNQVGELTNVLYHLMERKLIRLPLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66656; Mature: 66656

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHNLTSIMLAVAGAMANKSGIELVIDPQATTFSTDGRRLKIPPIAKLTEWFPCIDDLET
CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCEEECCCHHHHHHHCCCHHHHHH
YIIGAVVHEAGHIRFTDRTLRVGFKKSFTGHAKYKMADVVGQCMEDVAIERTQCNALPGA
HHHHHHHHCCCCEEEECCCEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RPALTKLWKLLYDGHSSEEAHAQADAVFTHYVFFRARHSVLKTEWTLAACETAAIRLAST
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTHDQITLLENELAVLDLVSSTADAVALSLRLLRLVGVEPVSVQDDEDQPESDANKGPDQ
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QPQGGASKPADSPEHAERGQGDHANQESTPCAGAETATDGPDKPESEDDEAEGATGPSGQ
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TEPGNESGRGEPLDAVAGEETQVSAGAGGLAEVDPLELISMAVQELQEELPEATEYEFVM
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
PGLIPGSSLASVEFEEKHRGGMELRSKILVHTMMASARLSTLLKAQTESKTEFCKRGKIV
CCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PSRLWKLQAGSTRVFRHTVEGKDLNTAIKVLLDRSLSMKKTMKRAIEAACFLPMAFDDVS
HHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCC
GISTSIDIFPGTLRAAESLKRFGERTMPCLDALASVRAKGGTPLGAALEISGMELVQFNA
CCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECC
ERRLLVVITDGAPDRLNEAKAQLRALESADVEVIGIGIGVSLKHLFTDFVSVNQVGELTN
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
VLYHLMERKLIRLPLAA
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQHNLTSIMLAVAGAMANKSGIELVIDPQATTFSTDGRRLKIPPIAKLTEWFPCIDDLET
CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCEEECCCHHHHHHHCCCHHHHHH
YIIGAVVHEAGHIRFTDRTLRVGFKKSFTGHAKYKMADVVGQCMEDVAIERTQCNALPGA
HHHHHHHHCCCCEEEECCCEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RPALTKLWKLLYDGHSSEEAHAQADAVFTHYVFFRARHSVLKTEWTLAACETAAIRLAST
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTHDQITLLENELAVLDLVSSTADAVALSLRLLRLVGVEPVSVQDDEDQPESDANKGPDQ
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QPQGGASKPADSPEHAERGQGDHANQESTPCAGAETATDGPDKPESEDDEAEGATGPSGQ
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TEPGNESGRGEPLDAVAGEETQVSAGAGGLAEVDPLELISMAVQELQEELPEATEYEFVM
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
PGLIPGSSLASVEFEEKHRGGMELRSKILVHTMMASARLSTLLKAQTESKTEFCKRGKIV
CCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PSRLWKLQAGSTRVFRHTVEGKDLNTAIKVLLDRSLSMKKTMKRAIEAACFLPMAFDDVS
HHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCC
GISTSIDIFPGTLRAAESLKRFGERTMPCLDALASVRAKGGTPLGAALEISGMELVQFNA
CCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECC
ERRLLVVITDGAPDRLNEAKAQLRALESADVEVIGIGIGVSLKHLFTDFVSVNQVGELTN
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
VLYHLMERKLIRLPLAA
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA