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The map label for this gene is 89885746

Identifier: 89885746

GI number: 89885746

Start: 14893

End: 15657

Strand: Reverse

Name: 89885746

Synonym: Rfer_4259

Alternate gene names: NA

Gene position: 15657-14893 (Counterclockwise)

Preceding gene: 89885747

Following gene: 89885745

Centisome position: 6.08

GC content: 48.5

Gene sequence:

>765_bases
ATGCGTAGATTGTTTATTTCCCTGTGCTTGGTATTTACTGGAATGAATGCGTTTGCCATGGCTTCAGGCAGCGTCGTGTT
TGATCCCGCCAACTACAGTCAAACCCTGATCACTGCCGGTCAATCAGTCAAACTTCTCAGTGAGTCTGTTGGCGGCAATT
TGACAAAATTGAGACAACTGCAGGAACTTTACAAACAGGGCAGGGCGATTGCTTCGGGCGATGTGAATGCCATCGCCGGG
GTTGTCGGCGGACCTCAACTCCAGTCCCAGATTCGAGACATGCAAGGGATGAAGAAAGCACTTACAAATCTCAATGGGAA
TATTGATGACTTGACTGGGCGATATAACTACACGATGCAGATGTCACAAAAGTACGGCGTGAGCGTGCAGGAATATCAGG
CTGCGCAAGCACGACGGGTGTCGCAAGGCATTGAGTCGGCAAGACTGGAACAACAACAAAACATGCGGGCGCTCAAGAGC
GTGGATGACTCCTATGTGCAACTACAAAAGTGGCAAGAGAGATTGCCAGAAACAAATACCGAGTTGATGCAGATGATGAA
TATGCACATGACGATGCTTAACACGAATAATGCACAAGTGCTGTCCTACATGGCGCGCAATAATGCAGCAGAACAGGACC
GTACGGTTAAGACAGCGGCGGAAGAACAGAGCAAGAGAGATTACGAGGAAAAGAATGCAGCAGATGCCAAACGGCATGGC
GACGATACTTGGAATAGACTGATAGGCGGATTCAGGAAGAAATAA

Upstream 100 bases:

>100_bases
CTATGCCACCAGAGAAGCCAACGCCGGTTGGAAACAAAGCTATTTCGAAGAGATGATTGGTTAGGCAGAGAGATTTTTTT
TTGTTAATAGAGGAACCACT

Downstream 100 bases:

>100_bases
TCTTTCAGTAAATTGACATGTGCTTCTTCCAAAAATGTCGTGCCTTGTTGGGGGCCTTGATTATTCTGTCAATTCCTGTG
CCAGGCCTAACTGCAGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRRLFISLCLVFTGMNAFAMASGSVVFDPANYSQTLITAGQSVKLLSESVGGNLTKLRQLQELYKQGRAIASGDVNAIAG
VVGGPQLQSQIRDMQGMKKALTNLNGNIDDLTGRYNYTMQMSQKYGVSVQEYQAAQARRVSQGIESARLEQQQNMRALKS
VDDSYVQLQKWQERLPETNTELMQMMNMHMTMLNTNNAQVLSYMARNNAAEQDRTVKTAAEEQSKRDYEEKNAADAKRHG
DDTWNRLIGGFRKK

Sequences:

>Translated_254_residues
MRRLFISLCLVFTGMNAFAMASGSVVFDPANYSQTLITAGQSVKLLSESVGGNLTKLRQLQELYKQGRAIASGDVNAIAG
VVGGPQLQSQIRDMQGMKKALTNLNGNIDDLTGRYNYTMQMSQKYGVSVQEYQAAQARRVSQGIESARLEQQQNMRALKS
VDDSYVQLQKWQERLPETNTELMQMMNMHMTMLNTNNAQVLSYMARNNAAEQDRTVKTAAEEQSKRDYEEKNAADAKRHG
DDTWNRLIGGFRKK
>Mature_254_residues
MRRLFISLCLVFTGMNAFAMASGSVVFDPANYSQTLITAGQSVKLLSESVGGNLTKLRQLQELYKQGRAIASGDVNAIAG
VVGGPQLQSQIRDMQGMKKALTNLNGNIDDLTGRYNYTMQMSQKYGVSVQEYQAAQARRVSQGIESARLEQQQNMRALKS
VDDSYVQLQKWQERLPETNTELMQMMNMHMTMLNTNNAQVLSYMARNNAAEQDRTVKTAAEEQSKRDYEEKNAADAKRHG
DDTWNRLIGGFRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28509; Mature: 28509

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLFISLCLVFTGMNAFAMASGSVVFDPANYSQTLITAGQSVKLLSESVGGNLTKLRQL
CHHHHHHHHHHHHCCCHHHEECCCEEECCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHH
QELYKQGRAIASGDVNAIAGVVGGPQLQSQIRDMQGMKKALTNLNGNIDDLTGRYNYTMQ
HHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEE
MSQKYGVSVQEYQAAQARRVSQGIESARLEQQQNMRALKSVDDSYVQLQKWQERLPETNT
ECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
ELMQMMNMHMTMLNTNNAQVLSYMARNNAAEQDRTVKTAAEEQSKRDYEEKNAADAKRHG
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDTWNRLIGGFRKK
CHHHHHHHHHHCCC
>Mature Secondary Structure
MRRLFISLCLVFTGMNAFAMASGSVVFDPANYSQTLITAGQSVKLLSESVGGNLTKLRQL
CHHHHHHHHHHHHCCCHHHEECCCEEECCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHH
QELYKQGRAIASGDVNAIAGVVGGPQLQSQIRDMQGMKKALTNLNGNIDDLTGRYNYTMQ
HHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEE
MSQKYGVSVQEYQAAQARRVSQGIESARLEQQQNMRALKSVDDSYVQLQKWQERLPETNT
ECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
ELMQMMNMHMTMLNTNNAQVLSYMARNNAAEQDRTVKTAAEEQSKRDYEEKNAADAKRHG
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDTWNRLIGGFRKK
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA