Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256727
Identifier: 89256727
GI number: 89256727
Start: 1364963
End: 1365553
Strand: Reverse
Name: 89256727
Synonym: FTL_1434
Alternate gene names: NA
Gene position: 1365553-1364963 (Counterclockwise)
Preceding gene: 89256728
Following gene: 89256725
Centisome position: 72.02
GC content: 35.87
Gene sequence:
>591_bases ATGATAAATAGAATATATGATATATATTACAAGATTATCCAAAAGTTTCAGTCTATCGATTTTTTACTTTTGTTAGGTAT AAGACTCTATTTAGTGCCGACTATGTTTGTAGGTGCTAGATCAAAAATAGAAGGTTTTAGTACAACCGTAGCATGGTTCG GTGCTCCAGCTTCACAGGGAGGACTAGGTATGCCAATGCCAGAAGTAATGGCATTTTTAGCAACTTCCGCAGAAGTTATT GGCTGTATTGGTATAGCATTAGGTTTATTTACTAGACTTGTTTCTATTCCAATGATGTTTGTAATGGGTGTTGCTGGTGC CGCGGTTCACTGGGCTCATCGATGGCCTGCGATCGCAGACAAAACTGCAGAATCTACACAGAGACTAAATGATCTATTTG TATGGTTATCACAAAACTTCCCAGATAGATATAACTATGTTACTGCGTTAGGTGATCCTGTAATGCTTAATGGTGGTATG GAATTTTCTGTTACATATTTCATTATGTTATTTACATTATTCTTATATGGTGGTGGAAGATATGTAAGTGCTGACCATTG GTTGAAAAAGATTTTTATAAAACAGTTATAG
Upstream 100 bases:
>100_bases TTTAAACAAATAAAAAATGAGCAACAAGAGTACTTAATTAATCGTTTAGTCTCTTGGCACAATCAAAATATGATTACTTT ATCAATATAAGGAGCAATTT
Downstream 100 bases:
>100_bases AAGTTATCTAAGTTCAAGTTTGATAAGATCATGCATTGTTACTATACCTAGTATATTATGGCCATTGTCGACTACTGCTA GACTTGTGATTTCATATTTT
Product: DoxD-like family protein
Products: NA
Alternate protein names: DoxX Subfamily; DoxD-Like Family Protein; DoxX Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MINRIYDIYYKIIQKFQSIDFLLLLGIRLYLVPTMFVGARSKIEGFSTTVAWFGAPASQGGLGMPMPEVMAFLATSAEVI GCIGIALGLFTRLVSIPMMFVMGVAGAAVHWAHRWPAIADKTAESTQRLNDLFVWLSQNFPDRYNYVTALGDPVMLNGGM EFSVTYFIMLFTLFLYGGGRYVSADHWLKKIFIKQL
Sequences:
>Translated_196_residues MINRIYDIYYKIIQKFQSIDFLLLLGIRLYLVPTMFVGARSKIEGFSTTVAWFGAPASQGGLGMPMPEVMAFLATSAEVI GCIGIALGLFTRLVSIPMMFVMGVAGAAVHWAHRWPAIADKTAESTQRLNDLFVWLSQNFPDRYNYVTALGDPVMLNGGM EFSVTYFIMLFTLFLYGGGRYVSADHWLKKIFIKQL >Mature_196_residues MINRIYDIYYKIIQKFQSIDFLLLLGIRLYLVPTMFVGARSKIEGFSTTVAWFGAPASQGGLGMPMPEVMAFLATSAEVI GCIGIALGLFTRLVSIPMMFVMGVAGAAVHWAHRWPAIADKTAESTQRLNDLFVWLSQNFPDRYNYVTALGDPVMLNGGM EFSVTYFIMLFTLFLYGGGRYVSADHWLKKIFIKQL
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21989; Mature: 21989
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINRIYDIYYKIIQKFQSIDFLLLLGIRLYLVPTMFVGARSKIEGFSTTVAWFGAPASQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHEECCCCCCC GLGMPMPEVMAFLATSAEVIGCIGIALGLFTRLVSIPMMFVMGVAGAAVHWAHRWPAIAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KTAESTQRLNDLFVWLSQNFPDRYNYVTALGDPVMLNGGMEFSVTYFIMLFTLFLYGGGR HHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC YVSADHWLKKIFIKQL EECHHHHHHHHHHHCC >Mature Secondary Structure MINRIYDIYYKIIQKFQSIDFLLLLGIRLYLVPTMFVGARSKIEGFSTTVAWFGAPASQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHEECCCCCCC GLGMPMPEVMAFLATSAEVIGCIGIALGLFTRLVSIPMMFVMGVAGAAVHWAHRWPAIAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KTAESTQRLNDLFVWLSQNFPDRYNYVTALGDPVMLNGGMEFSVTYFIMLFTLFLYGGGR HHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC YVSADHWLKKIFIKQL EECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA