Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256720
Identifier: 89256720
GI number: 89256720
Start: 1356584
End: 1357870
Strand: Reverse
Name: 89256720
Synonym: FTL_1427
Alternate gene names: NA
Gene position: 1357870-1356584 (Counterclockwise)
Preceding gene: 89256721
Following gene: 89256719
Centisome position: 71.62
GC content: 30.54
Gene sequence:
>1287_bases GTGGTGAAATCGATAAAGGATGATTGCTATGACTTTGATAATAATATAGTGTTTGTTTTTGATTTAGATGGAACTCTTAC AAAAAATGAAACGTTACCAGTTATTGCCAGATATTTTGGTATTGAAGATGAAATAAGTAAGCTAACAGCAGAAACAGTAA AAGGTAATATACCTTTTATAGAAAGTTTTATTAAGAGAGTTAATATATTAAAAGACTTTTCTATTAGTGAAATAAATAAT TTACTAAGAGGAGTTGATCTGTTTAGTAAAATTGTTGATTTCATAAAATTGTATAAAAGTAACTGTTATATTGCTACAGG TAATTTTGATGGTTGGGTTTCCGGTCTTATTGAAAAAATAGATTGTAAATCCTTTGCATCAGAAGGTTTTGTAAAGGATG ATCAACTTTTAAGTTTAAAGTTGATTTTAAATAAGAAAAAAGTAGTGGAAATGCTACAAGCATCAGGAAAAAAAGTTGTG TTTATAGGCGATGGTAATAATGATGCAGAGGCTATGAGAGTTGCAGATATATCTATAGCTTGTGGGCTAGTTCACTATCC ATCTAAGAGTGTAATGAATGTTGCGGACTATGCTATTTTTGAGGAAGAAGCATTATGTAGACTTTTAAAACAGATACACA TTCTAAAATCGTTAGGTAAGTCAATTATTTTAAGTTGCGCAGGTATTGGATCAAGATTAGGGCTTGGTAAAACAAAGGCA TTAATCGAAATTAACTCTAAATCACTAATCGATTACCAGCTTAGTAATTTTAAAAATATCGAAGATATTCGAATAGTTAT AGGTTACCAAGCTAATGAAGTTATCAGTGCAGCTTTATCTATACGTAAAGATATTATTTTTGTATTTAATCATGATTATT TTAATACTAAGACAGGTGCTAGTTTTTATTTAGGTGCTAGACATGCAAATGAATATCTCATAGCATGGGATGGCGACTTG TTAGTACATCCTGAAGATATAGGCAAATGTTTAAACTATGATAGAGAGTATATTGGGTGTTCTGATATTGTAAGTGATGA ACCTGTTTATGTTATCGTAAATGAAAATAATGAATGCATTGCCTTTTCGAGAGATAATGGCGACTTTGAATGGGTTGGTC CAGCGTGCTTTAAGAAAGAAAAATTAAGATTTGTAACTAATAACGTTTATAATTTATTCGAGAGCGAGCTTCCTATACCT ATTTTAAGAGTTCGTGCTAGAGATATTGATACATATGATGATTACATACGTGCTAAGAACTTTGTGGGAGAATGGTCTAA TGAATAA
Upstream 100 bases:
>100_bases GAATTAAAAGATATAACCATAATAACAATAGCACATAGACTTTCTACTATAGAAGGATATGATATGGTTTATAGTTTAAA TAATTAGGAGATTAAAATCT
Downstream 100 bases:
>100_bases AAAAATAGAAGCATATTATGATATCTTATCAAGGAAAATCAAATCCCCATATGAAACAAGAAATAAATCTAAAGATTTTT CTCAATATGATATTTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MVKSIKDDCYDFDNNIVFVFDLDGTLTKNETLPVIARYFGIEDEISKLTAETVKGNIPFIESFIKRVNILKDFSISEINN LLRGVDLFSKIVDFIKLYKSNCYIATGNFDGWVSGLIEKIDCKSFASEGFVKDDQLLSLKLILNKKKVVEMLQASGKKVV FIGDGNNDAEAMRVADISIACGLVHYPSKSVMNVADYAIFEEEALCRLLKQIHILKSLGKSIILSCAGIGSRLGLGKTKA LIEINSKSLIDYQLSNFKNIEDIRIVIGYQANEVISAALSIRKDIIFVFNHDYFNTKTGASFYLGARHANEYLIAWDGDL LVHPEDIGKCLNYDREYIGCSDIVSDEPVYVIVNENNECIAFSRDNGDFEWVGPACFKKEKLRFVTNNVYNLFESELPIP ILRVRARDIDTYDDYIRAKNFVGEWSNE
Sequences:
>Translated_428_residues MVKSIKDDCYDFDNNIVFVFDLDGTLTKNETLPVIARYFGIEDEISKLTAETVKGNIPFIESFIKRVNILKDFSISEINN LLRGVDLFSKIVDFIKLYKSNCYIATGNFDGWVSGLIEKIDCKSFASEGFVKDDQLLSLKLILNKKKVVEMLQASGKKVV FIGDGNNDAEAMRVADISIACGLVHYPSKSVMNVADYAIFEEEALCRLLKQIHILKSLGKSIILSCAGIGSRLGLGKTKA LIEINSKSLIDYQLSNFKNIEDIRIVIGYQANEVISAALSIRKDIIFVFNHDYFNTKTGASFYLGARHANEYLIAWDGDL LVHPEDIGKCLNYDREYIGCSDIVSDEPVYVIVNENNECIAFSRDNGDFEWVGPACFKKEKLRFVTNNVYNLFESELPIP ILRVRARDIDTYDDYIRAKNFVGEWSNE >Mature_428_residues MVKSIKDDCYDFDNNIVFVFDLDGTLTKNETLPVIARYFGIEDEISKLTAETVKGNIPFIESFIKRVNILKDFSISEINN LLRGVDLFSKIVDFIKLYKSNCYIATGNFDGWVSGLIEKIDCKSFASEGFVKDDQLLSLKLILNKKKVVEMLQASGKKVV FIGDGNNDAEAMRVADISIACGLVHYPSKSVMNVADYAIFEEEALCRLLKQIHILKSLGKSIILSCAGIGSRLGLGKTKA LIEINSKSLIDYQLSNFKNIEDIRIVIGYQANEVISAALSIRKDIIFVFNHDYFNTKTGASFYLGARHANEYLIAWDGDL LVHPEDIGKCLNYDREYIGCSDIVSDEPVYVIVNENNECIAFSRDNGDFEWVGPACFKKEKLRFVTNNVYNLFESELPIP ILRVRARDIDTYDDYIRAKNFVGEWSNE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 48361; Mature: 48361
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSIKDDCYDFDNNIVFVFDLDGTLTKNETLPVIARYFGIEDEISKLTAETVKGNIPFI CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHH ESFIKRVNILKDFSISEINNLLRGVDLFSKIVDFIKLYKSNCYIATGNFDGWVSGLIEKI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH DCKSFASEGFVKDDQLLSLKLILNKKKVVEMLQASGKKVVFIGDGNNDAEAMRVADISIA HHHHHHHCCCCCCCCEEEEEEHHCHHHHHHHHHCCCCEEEEEECCCCCCHHEEEEEEEEE CGLVHYPSKSVMNVADYAIFEEEALCRLLKQIHILKSLGKSIILSCAGIGSRLGLGKTKA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE LIEINSKSLIDYQLSNFKNIEDIRIVIGYQANEVISAALSIRKDIIFVFNHDYFNTKTGA EEEECCCCEEEEHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC SFYLGARHANEYLIAWDGDLLVHPEDIGKCLNYDREYIGCSDIVSDEPVYVIVNENNECI EEEEEEECCCCEEEEECCCEEECHHHHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCCEE AFSRDNGDFEWVGPACFKKEKLRFVTNNVYNLFESELPIPILRVRARDIDTYDDYIRAKN EEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH FVGEWSNE HCCCCCCC >Mature Secondary Structure MVKSIKDDCYDFDNNIVFVFDLDGTLTKNETLPVIARYFGIEDEISKLTAETVKGNIPFI CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHH ESFIKRVNILKDFSISEINNLLRGVDLFSKIVDFIKLYKSNCYIATGNFDGWVSGLIEKI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH DCKSFASEGFVKDDQLLSLKLILNKKKVVEMLQASGKKVVFIGDGNNDAEAMRVADISIA HHHHHHHCCCCCCCCEEEEEEHHCHHHHHHHHHCCCCEEEEEECCCCCCHHEEEEEEEEE CGLVHYPSKSVMNVADYAIFEEEALCRLLKQIHILKSLGKSIILSCAGIGSRLGLGKTKA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE LIEINSKSLIDYQLSNFKNIEDIRIVIGYQANEVISAALSIRKDIIFVFNHDYFNTKTGA EEEECCCCEEEEHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC SFYLGARHANEYLIAWDGDLLVHPEDIGKCLNYDREYIGCSDIVSDEPVYVIVNENNECI EEEEEEECCCCEEEEECCCEEECHHHHHHHHCCCCCCCCHHHCCCCCCEEEEECCCCCEE AFSRDNGDFEWVGPACFKKEKLRFVTNNVYNLFESELPIPILRVRARDIDTYDDYIRAKN EEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH FVGEWSNE HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 11342136; 12051918 [H]