Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256719
Identifier: 89256719
GI number: 89256719
Start: 1355962
End: 1356636
Strand: Reverse
Name: 89256719
Synonym: FTL_1426
Alternate gene names: NA
Gene position: 1356636-1355962 (Counterclockwise)
Preceding gene: 89256720
Following gene: 89256718
Centisome position: 71.55
GC content: 24.89
Gene sequence:
>675_bases ATGATGATTACATACGTGCTAAGAACTTTGTGGGAGAATGGTCTAATGAATAAAAAAATAGAAGCATATTATGATATCTT ATCAAGGAAAATCAAATCCCCATATGAAACAAGAAATAAATCTAAAGATTTTTCTCAATATGATATTTTTTTAGTAAAAA AGCTAGCAGATAGGTCAAAAAATTTATTAGATCTTGGATCTGGGACAGGATTGTTGATTAATAGTATTCATAACTGCTTC AAAAAAATAGTTGCTGTTGAGAAGTATAAAGAGTTTTCAGATTTTATAATTAGAAAACCAAATATAGATATTATTAACGA AGATATTACCAATTTTAAAACACATGAAAAATTTGATATTATTACTATTTTTGGAGTTATGAATTTTTTTAATGCGCAAG AAGCCAAATATGTTTATAAAAAAGTTTTATCTATGATGCATACTAATGGAGTACTAATTATAAAAAACCAATTTGGTCTA AACGATAATGTGGTTATAGATGGATATTCTGAAGAACTTAAATCAAACTATTATTCAGAATATAGATATATTGATGGAGA AATAAATTTACTACAGAAAATTGGTTTTAATAGTATTGAAAAAATTGATATTTATCCAAAAGAGTATAATCGATGGTCAA ATACTCATTTTTATGCTTTAGTATGTAAGAGGTGA
Upstream 100 bases:
>100_bases AAAGAAAAATTAAGATTTGTAACTAATAACGTTTATAATTTATTCGAGAGCGAGCTTCCTATACCTATTTTAAGAGTTCG TGCTAGAGATATTGATACAT
Downstream 100 bases:
>100_bases AATTTGTCTTTAATTCGTAAAATAAAATTATCTCTTCGTAATATTATTCATACAATATTAGAAAATAAAAGAAATAAGTT TTTGAAACGTAACGGCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MMITYVLRTLWENGLMNKKIEAYYDILSRKIKSPYETRNKSKDFSQYDIFLVKKLADRSKNLLDLGSGTGLLINSIHNCF KKIVAVEKYKEFSDFIIRKPNIDIINEDITNFKTHEKFDIITIFGVMNFFNAQEAKYVYKKVLSMMHTNGVLIIKNQFGL NDNVVIDGYSEELKSNYYSEYRYIDGEINLLQKIGFNSIEKIDIYPKEYNRWSNTHFYALVCKR
Sequences:
>Translated_224_residues MMITYVLRTLWENGLMNKKIEAYYDILSRKIKSPYETRNKSKDFSQYDIFLVKKLADRSKNLLDLGSGTGLLINSIHNCF KKIVAVEKYKEFSDFIIRKPNIDIINEDITNFKTHEKFDIITIFGVMNFFNAQEAKYVYKKVLSMMHTNGVLIIKNQFGL NDNVVIDGYSEELKSNYYSEYRYIDGEINLLQKIGFNSIEKIDIYPKEYNRWSNTHFYALVCKR >Mature_224_residues MMITYVLRTLWENGLMNKKIEAYYDILSRKIKSPYETRNKSKDFSQYDIFLVKKLADRSKNLLDLGSGTGLLINSIHNCF KKIVAVEKYKEFSDFIIRKPNIDIINEDITNFKTHEKFDIITIFGVMNFFNAQEAKYVYKKVLSMMHTNGVLIIKNQFGL NDNVVIDGYSEELKSNYYSEYRYIDGEINLLQKIGFNSIEKIDIYPKEYNRWSNTHFYALVCKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26496; Mature: 26496
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMITYVLRTLWENGLMNKKIEAYYDILSRKIKSPYETRNKSKDFSQYDIFLVKKLADRSK CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCC NLLDLGSGTGLLINSIHNCFKKIVAVEKYKEFSDFIIRKPNIDIINEDITNFKTHEKFDI CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCHHCCCCCCCCHH ITIFGVMNFFNAQEAKYVYKKVLSMMHTNGVLIIKNQFGLNDNVVIDGYSEELKSNYYSE HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHH YRYIDGEINLLQKIGFNSIEKIDIYPKEYNRWSNTHFYALVCKR HEEECCHHHHHHHCCCCCCEEEECCCHHCCCCCCCEEEEEEECC >Mature Secondary Structure MMITYVLRTLWENGLMNKKIEAYYDILSRKIKSPYETRNKSKDFSQYDIFLVKKLADRSK CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCC NLLDLGSGTGLLINSIHNCFKKIVAVEKYKEFSDFIIRKPNIDIINEDITNFKTHEKFDI CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCHHCCCCCCCCHH ITIFGVMNFFNAQEAKYVYKKVLSMMHTNGVLIIKNQFGLNDNVVIDGYSEELKSNYYSE HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHH YRYIDGEINLLQKIGFNSIEKIDIYPKEYNRWSNTHFYALVCKR HEEECCHHHHHHHCCCCCCEEEECCCHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA