Click here to switch to the map view.

The map label for this gene is 89256628

Identifier: 89256628

GI number: 89256628

Start: 1256815

End: 1257387

Strand: Reverse

Name: 89256628

Synonym: FTL_1320

Alternate gene names: NA

Gene position: 1257387-1256815 (Counterclockwise)

Preceding gene: 89256629

Following gene: 89256626

Centisome position: 66.32

GC content: 30.54

Gene sequence:

>573_bases
ATGGACATATTTGATAATGATTTATCTATTCCTGTTAATTTAATTAGACAATGGTGTTTTTGTCCGAGAATAGTTTATTA
TCAAGAACTTCTTGCGATTAAGCCGAACAAACCATTATGGATTGCTCAAGGTGAAGAATTTCATAAAAAAGTAGAGCAAC
TTGAGAAAAGACGCAGCTTTAGCAGATATGGTTTAAATAATGCAATCAGGCATTTTAATCTAAGTATAAAAAGTCAGAAA
TATAAACTACATGGTATAGTTGACTGGGTTATAGAAACTGATACTAATGTATATGTGGTTGAGTATAAGACAAATCCTAA
TCCAAATAGCTTAGGGCATAAACTACAAATTGCAGCTTATGCTTTGCTAGTACAGGAATATTTTGCTAAACCATGTAAGA
CTACATTTCTAACCTCTGATAAAAAATCATATGAGATAAAAATAACTGATGAGTTAATCAACAAACTTATAAAAACTATC
AGCGATATTCTTAGTACTTTAGATAGTGGTAATAAGCCAGATTCATCTGCATCGGAACAATGTGAATATTACAACTTTTG
TAATGATCGTTGA

Upstream 100 bases:

>100_bases
ATTTCAGATAAGGTATTTATTACTAGAGTAAATATGCATGAGCAAAAACTAGATTATAGCTTTGGTTACGATGATAAAAC
TTTCAAAGACTGGGATGAAT

Downstream 100 bases:

>100_bases
TAGTAAAATCTCTAATTGCCACTGAAGGCGGAAATCTCGCAAATACTTAGAAATCTCCATATTAAATTTCTCAGCCATCT
TGATGTAATCGAGCTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MDIFDNDLSIPVNLIRQWCFCPRIVYYQELLAIKPNKPLWIAQGEEFHKKVEQLEKRRSFSRYGLNNAIRHFNLSIKSQK
YKLHGIVDWVIETDTNVYVVEYKTNPNPNSLGHKLQIAAYALLVQEYFAKPCKTTFLTSDKKSYEIKITDELINKLIKTI
SDILSTLDSGNKPDSSASEQCEYYNFCNDR

Sequences:

>Translated_190_residues
MDIFDNDLSIPVNLIRQWCFCPRIVYYQELLAIKPNKPLWIAQGEEFHKKVEQLEKRRSFSRYGLNNAIRHFNLSIKSQK
YKLHGIVDWVIETDTNVYVVEYKTNPNPNSLGHKLQIAAYALLVQEYFAKPCKTTFLTSDKKSYEIKITDELINKLIKTI
SDILSTLDSGNKPDSSASEQCEYYNFCNDR
>Mature_190_residues
MDIFDNDLSIPVNLIRQWCFCPRIVYYQELLAIKPNKPLWIAQGEEFHKKVEQLEKRRSFSRYGLNNAIRHFNLSIKSQK
YKLHGIVDWVIETDTNVYVVEYKTNPNPNSLGHKLQIAAYALLVQEYFAKPCKTTFLTSDKKSYEIKITDELINKLIKTI
SDILSTLDSGNKPDSSASEQCEYYNFCNDR

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22196; Mature: 22196

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFDNDLSIPVNLIRQWCFCPRIVYYQELLAIKPNKPLWIAQGEEFHKKVEQLEKRRSF
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHH
SRYGLNNAIRHFNLSIKSQKYKLHGIVDWVIETDTNVYVVEYKTNPNPNSLGHKLQIAAY
HHHCHHHHHHHHCEEEECCEEEEEEEEEEEEECCCCEEEEEEECCCCCCHHCHHHHHHHH
ALLVQEYFAKPCKTTFLTSDKKSYEIKITDELINKLIKTISDILSTLDSGNKPDSSASEQ
HHHHHHHHCCCCCHHEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
CEYYNFCNDR
HHHHHCCCCC
>Mature Secondary Structure
MDIFDNDLSIPVNLIRQWCFCPRIVYYQELLAIKPNKPLWIAQGEEFHKKVEQLEKRRSF
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHH
SRYGLNNAIRHFNLSIKSQKYKLHGIVDWVIETDTNVYVVEYKTNPNPNSLGHKLQIAAY
HHHCHHHHHHHHCEEEECCEEEEEEEEEEEEECCCCEEEEEEECCCCCCHHCHHHHHHHH
ALLVQEYFAKPCKTTFLTSDKKSYEIKITDELINKLIKTISDILSTLDSGNKPDSSASEQ
HHHHHHHHCCCCCHHEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
CEYYNFCNDR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA