Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256608
Identifier: 89256608
GI number: 89256608
Start: 1238007
End: 1238456
Strand: Reverse
Name: 89256608
Synonym: FTL_1299
Alternate gene names: NA
Gene position: 1238456-1238007 (Counterclockwise)
Preceding gene: 89256609
Following gene: 89256606
Centisome position: 65.32
GC content: 32.22
Gene sequence:
>450_bases ATGAAGAAAATAATTATAGTAATAGCCTCTATGCTAATTGCTTTGACAGCAAATGCAACAGGGGATTGTAGTGACAAAAG TTTTAATGATATAAAAAGTAAGGCTAGACAAATGGAGCAAGCTTGGGATTCAGCTGATGTTGAAAAAGTAGTTTCGTTTT ATGCTGATGATTTTATATACATGAGTGGTGGTAAGCCTTATACAACTAAAAATGCTATACTAAAACATTATGTCGATGGA TTTGCTGCAAACAGCTCTGGTAAGAGAGATATGGGTAAACTTAAGCTTAATTATCAATATTGTAGAAATCTTGATCAAAA TTATCAGTTAGTCATACTAAAGTTTATTTGGACAAGTTCGGATAATAAGGTTGCCTCAGGTCATGACTTACTTGTTTGGC ATAAAGATAGTAAAGGTGATTATGAAATTATTGTAGATTTTCCACAGTAG
Upstream 100 bases:
>100_bases AGATTGTATTGCATTTTGAATGCTTGCGACCATTTGAGAGTAATCCAAAAATTTTAACAAAAGACGTGACAGTTCTATCG CTGCCAGATTAGGAGAATTT
Downstream 100 bases:
>100_bases TAGTTTATATAAAGATAGGAGATATAGTTAATCCGAGAGTATTTTGTTAAACACATAAGAGATAGCATCACAAAATTTTT CAAAACTATTATTCACTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKKIIIVIASMLIALTANATGDCSDKSFNDIKSKARQMEQAWDSADVEKVVSFYADDFIYMSGGKPYTTKNAILKHYVDG FAANSSGKRDMGKLKLNYQYCRNLDQNYQLVILKFIWTSSDNKVASGHDLLVWHKDSKGDYEIIVDFPQ
Sequences:
>Translated_149_residues MKKIIIVIASMLIALTANATGDCSDKSFNDIKSKARQMEQAWDSADVEKVVSFYADDFIYMSGGKPYTTKNAILKHYVDG FAANSSGKRDMGKLKLNYQYCRNLDQNYQLVILKFIWTSSDNKVASGHDLLVWHKDSKGDYEIIVDFPQ >Mature_149_residues MKKIIIVIASMLIALTANATGDCSDKSFNDIKSKARQMEQAWDSADVEKVVSFYADDFIYMSGGKPYTTKNAILKHYVDG FAANSSGKRDMGKLKLNYQYCRNLDQNYQLVILKFIWTSSDNKVASGHDLLVWHKDSKGDYEIIVDFPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16876; Mature: 16876
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIIVIASMLIALTANATGDCSDKSFNDIKSKARQMEQAWDSADVEKVVSFYADDFIY CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEE MSGGKPYTTKNAILKHYVDGFAANSSGKRDMGKLKLNYQYCRNLDQNYQLVILKFIWTSS ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHCCCCCCCEEEEEEEEEECC DNKVASGHDLLVWHKDSKGDYEIIVDFPQ CCCEECCCEEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MKKIIIVIASMLIALTANATGDCSDKSFNDIKSKARQMEQAWDSADVEKVVSFYADDFIY CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEE MSGGKPYTTKNAILKHYVDGFAANSSGKRDMGKLKLNYQYCRNLDQNYQLVILKFIWTSS ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHCCCCCCCEEEEEEEEEECC DNKVASGHDLLVWHKDSKGDYEIIVDFPQ CCCEECCCEEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA