Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256609

Identifier: 89256609

GI number: 89256609

Start: 1238465

End: 1238806

Strand: Reverse

Name: 89256609

Synonym: FTL_1300

Alternate gene names: NA

Gene position: 1238806-1238465 (Counterclockwise)

Preceding gene: 89256613

Following gene: 89256608

Centisome position: 65.34

GC content: 33.92

Gene sequence:

>342_bases
ATGACTCAAGCTGAGATTGATAAGCTATACACAAAACCTATTGTTTTAAGTAGTAAACAATATACCTTTAATGTAGAACT
TCCGGTAGACTCTATAGATGGTTACAGATGGTTTTTAATTTCGCCAGATTATGATTACATTGATGATGATAGCTATAGCC
ATGAGAGTGTGGATATACAAAACTCAAAATGGGGTGGTATGGATAACTTTAAGCTTAAACTTACCAAGAAGTTTAGAAAA
GTTCCGCATAAGATTGTATTGCATTTTGAATGCTTGCGACCATTTGAGAGTAATCCAAAAATTTTAACAAAAGACGTGAC
AGTTCTATCGCTGCCAGATTAG

Upstream 100 bases:

>100_bases
TCTTAAATAACAGCAGTTTAGCTATTTTCAATATAATTTAAGTTTTTTGTGCACAGAACCTAGTTTTTTGCTGTTTTTTC
CTTGTCTAGGTTTAGCAACT

Downstream 100 bases:

>100_bases
GAGAATTTATGAAGAAAATAATTATAGTAATAGCCTCTATGCTAATTGCTTTGACAGCAAATGCAACAGGGGATTGTAGT
GACAAAAGTTTTAATGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTQAEIDKLYTKPIVLSSKQYTFNVELPVDSIDGYRWFLISPDYDYIDDDSYSHESVDIQNSKWGGMDNFKLKLTKKFRK
VPHKIVLHFECLRPFESNPKILTKDVTVLSLPD

Sequences:

>Translated_113_residues
MTQAEIDKLYTKPIVLSSKQYTFNVELPVDSIDGYRWFLISPDYDYIDDDSYSHESVDIQNSKWGGMDNFKLKLTKKFRK
VPHKIVLHFECLRPFESNPKILTKDVTVLSLPD
>Mature_112_residues
TQAEIDKLYTKPIVLSSKQYTFNVELPVDSIDGYRWFLISPDYDYIDDDSYSHESVDIQNSKWGGMDNFKLKLTKKFRKV
PHKIVLHFECLRPFESNPKILTKDVTVLSLPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13246; Mature: 13115

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAEIDKLYTKPIVLSSKQYTFNVELPVDSIDGYRWFLISPDYDYIDDDSYSHESVDIQ
CCHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC
NSKWGGMDNFKLKLTKKFRKVPHKIVLHFECLRPFESNPKILTKDVTVLSLPD
CCCCCCCCCEEEEEEHHHHCCCCEEEEEEEECCCCCCCCCEEEECEEEEECCC
>Mature Secondary Structure 
TQAEIDKLYTKPIVLSSKQYTFNVELPVDSIDGYRWFLISPDYDYIDDDSYSHESVDIQ
CHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC
NSKWGGMDNFKLKLTKKFRKVPHKIVLHFECLRPFESNPKILTKDVTVLSLPD
CCCCCCCCCEEEEEEHHHHCCCCEEEEEEEECCCCCCCCCEEEECEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA