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The map label for this gene is ycaM [C]

Identifier: 89256604

GI number: 89256604

Start: 1234474

End: 1235253

Strand: Reverse

Name: ycaM [C]

Synonym: FTL_1295

Alternate gene names: 89256604

Gene position: 1235253-1234474 (Counterclockwise)

Preceding gene: 89256605

Following gene: 89256598

Centisome position: 65.15

GC content: 30.77

Gene sequence:

>780_bases
ATGATTCCGCACGATAATATTTGGCATAACTTATCAACACTAACTATTATCATGTTTGCAATGGCAGGTATAGAAATCAT
TCCAACTTTTGCTAATTCAGTCAAAGATGCTAAGAAAAATCTATATTATGGTCTAATGTTTTCTGCATTCATTTTATTGG
GTTTGTATATATTAGGAACAATTGCTTTGAATCTTGTTGCATCACCTGACACGATAAATAGTGCTTCAGGACTTATGGAA
GCATTTGAAATAATTGGTCATAGATTTGGTTGGGAATGGTTCCCAAGGTTAATGGCTTTTTTACTTACTTTTGCAGAGCT
GGCTGCTGTGAGTATTTGGCTTTTAGCGCCTGTTGTAATGTTTTTTAAATGTACACCTAGAGGAATATTACCAGAGTGGT
TGCATAAAACTAATAAGTATGATTCTCCTAAAAATGCTTTAGTATTTATGGGGATATTAGTAACGGTTATAGTGTTACTA
ACTAATTTCTTACCATCAGTAAATTTGATGTATCAAGCTTTAATACTTATGGCTACAGTACTTTATTTTATCCCTTACTT
ATATTTGGTGGTTGCTTATATTAAGCTTATGGATAGTACTTATAAGTATTTATTAGGGTTTTTAGTATTTATATCGACAT
CACTTGGAATTATATTTAGTTTTCAACCATCTAGTGACTTAACAGGTGGATATGATATTTTCATATATGAATTTGAATTA
ATCCTTGGACCTGTAATTTTTATATTTATCGGTTGGTTGTTATATAAATTCAAGCGATAA

Upstream 100 bases:

>100_bases
AATATCTAGTTGATATGGGAGGTGTTCTAGGCTCTTTTTTACCTGCTTTATAGCATATTTAATTGTAGGAAAAAGTGCTA
CAGATTTTTCTTTGGCTAAT

Downstream 100 bases:

>100_bases
TTATTCAGAAATATAGTTCCACTAATATCTATTAAGGAAATTATCTAGAATATTTGTTGGTAGTATCCTTTTTAACGATG
CCATAATCCAAGTTGCTTTG

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIPHDNIWHNLSTLTIIMFAMAGIEIIPTFANSVKDAKKNLYYGLMFSAFILLGLYILGTIALNLVASPDTINSASGLME
AFEIIGHRFGWEWFPRLMAFLLTFAELAAVSIWLLAPVVMFFKCTPRGILPEWLHKTNKYDSPKNALVFMGILVTVIVLL
TNFLPSVNLMYQALILMATVLYFIPYLYLVVAYIKLMDSTYKYLLGFLVFISTSLGIIFSFQPSSDLTGGYDIFIYEFEL
ILGPVIFIFIGWLLYKFKR

Sequences:

>Translated_259_residues
MIPHDNIWHNLSTLTIIMFAMAGIEIIPTFANSVKDAKKNLYYGLMFSAFILLGLYILGTIALNLVASPDTINSASGLME
AFEIIGHRFGWEWFPRLMAFLLTFAELAAVSIWLLAPVVMFFKCTPRGILPEWLHKTNKYDSPKNALVFMGILVTVIVLL
TNFLPSVNLMYQALILMATVLYFIPYLYLVVAYIKLMDSTYKYLLGFLVFISTSLGIIFSFQPSSDLTGGYDIFIYEFEL
ILGPVIFIFIGWLLYKFKR
>Mature_259_residues
MIPHDNIWHNLSTLTIIMFAMAGIEIIPTFANSVKDAKKNLYYGLMFSAFILLGLYILGTIALNLVASPDTINSASGLME
AFEIIGHRFGWEWFPRLMAFLLTFAELAAVSIWLLAPVVMFFKCTPRGILPEWLHKTNKYDSPKNALVFMGILVTVIVLL
TNFLPSVNLMYQALILMATVLYFIPYLYLVVAYIKLMDSTYKYLLGFLVFISTSLGIIFSFQPSSDLTGGYDIFIYEFEL
ILGPVIFIFIGWLLYKFKR

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 29488; Mature: 29488

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8366052 [H]