| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256494
Identifier: 89256494
GI number: 89256494
Start: 1116477
End: 1118939
Strand: Reverse
Name: 89256494
Synonym: FTL_1172
Alternate gene names: NA
Gene position: 1118939-1116477 (Counterclockwise)
Preceding gene: 89256495
Following gene: 89256493
Centisome position: 59.02
GC content: 27.0
Gene sequence:
>2463_bases ATGATAGCAGTAAAAGATATAACTGATTTAAATATACAAGACATAATTAGTCAGTTAACTTCTGAAGTTATAAATGGCGA CACAACCTCTTCTTCTGCCAAGTTTGCTTGTGAAATTAATAGCTATATTATTAATTACAAACTATTAAACATTAATCTTA TTAATACTCAACTAAAAAATACAAAGATACTTTATAGAAAAGGCTTGATATCTAAGCTTGATTACGAAAAATATAAAAGA TATTGCGTAATATGTAGATTAAAAAATAACATAGATGAATTTATCTTATATTTTTCGACAAACTATAAAGACTCTCAAAG CTTAAAAATCGCAATTAAAGAATTACAAAACTCATGCTCATCAAGTTTAATTCTTGAGCTCCCTCATGATTACATAAGAA AAATTGATGTCTTACTAACTAGTATAGATAGTGCGATACAAAGATCAAGTGATCTCAACAAAACAATTATAAAACAGTTA AATAAGCTTAAAAGCAGCCTTTCACGATATATTGGGTATAATAATGTACTGCAAAAACAAGAAATTACTATAAATATAAA GCCTATTAATAAAAATTTTGAACTTGAGGATATAAGTTTTGTATCAACTAGAAATAAGCAATATTTTAAGCATAACTCTC TTACACTTAAAAATCCTCATATTGAAAAATTAGAAGTATGTGAAAATATCTACGGCATAAATGGCTGGTTAACTTTTGAT TTAGCATATATCAATAATCACAAAGACTTTAACTTCCTATTAAGCCCAAATCAACCCATATTATTTGATATTCAAATTAA TGATAGCTTCAATTTTTACAAAAAAGAATCTAAAAAAGATCATCATAAGAGAACAACCCGTTTTATGGCCATTGGCTTTA ATTCAAACAGTATAGATATTCATGAGAACTTTGAATACAGCATATATTCTTATACCAAAAATGTTTCTTCAGGAGTAAAA AAAATTAAAATACAATTCCATGACCCACTAAAAGCACTTTGGACTAAGCACAAACCATCTTATATAGCTTTAAATAAAAG CTTAGATGATATCTTTAAAGAGAATTTTTTCTTTGATAATTTAGTTTCTTTAGATACCAACAAAAGTAATAACCTAAAAA TACGTATACCACAAGCATTTATTTCTACAGTTAATCGAAATTTTTATGATTTTTTTATTCAACAACTTGAGCAAAATAAA TGCTATTTAAAATATTTCTGTGATAAGAAGAGTGGCAAAGTAAGCTATCATGTTGTAGATCAAGTAGATAATGACTTACA AAGGAATATCGTAAATTCAGATGAAGATTTAAAAGACAAACTATCTCCTTATGATATAAGCTGCTTCAAAAAACAAATTC TAATCTCAAATAAATCAAACTTTTATGTTAAAGAAAAAAATATATGTCCTGATGTGACTTTAACCACTCAAAAAAAGGAA GATCGAAAGATTTCAGATACCCTAATAAAGCCATTCTCATCCATACTCAAGGATAACTTACAATCTGTAGAGTATATACA AAGCAATAATGATGATATACAAGAAATTATTACTACAGGATTTGAGATATTACTGACATCAAGAAATACTCTGCCCTTCT TAGATACTGAAATTACTCTTTCTAAACTAGACAATGATCAAAACTATCTTTTAGGCGCAACAGATATAAAAAGCTTATAT ATAAGTCAAAGAAAGCTATTATTTAAAAGAAGTAAATACTGCTCTAAACAACTATATGAAAACTTACATAATTTTCACTA TAAAAGTGATTCTGAATCAGACGTATATGAAAAAATTGCTTTTACTAAATACCCTAGTCTGACACATGACAACTTAATAA CTTATAAAATTAAGAATTATAGTAATCTAACTCCTGAATATCCTAAGTACAAAAGTTTTAGTAACTTTTATATTAATGGT AGAGTAACGATTGGAGAAAATGTTAATAATGACTCCAAAAAAGCTTATAAATTCTTTAAAAATTATAAGCCAGAAGAAAG CTCAATCGCAGAATTTCAAGAAAATGGTGAAAAAGGTACTTCAGCTATACTAAATAGTAAGGCTGATATCTTATACGCAA TAGAAATTGCCAAGGAAATGTTATCTGATAAATCATCAGATAAGCCAATCATATACTTACCTCTAAAAGTAAACATAAAT TCTGCTAATAATCAATTTATACCATTGAGAAATGACGATATTATCTTAATTGAAATGCAGTCTTTTACTAAAGGTGAAAT TATTGAGTTAATTTCAAACTCTGCCATATCAACAAAGAAAGCTCAGCAGCAACTACTACAACGACAACTTCTTGGATCTA AAGAAAACTGTGAAATGGCATATACCCAAACAAGTGATAGCGAGACATTCTCACTAACTCAAGTAAATGAAGATTGTGAG AATTCTTTTTTGATAAATGATAAAAAAGGTATTTTTCTAAGATATAAATCAAAAGGAAATTAA
Upstream 100 bases:
>100_bases TTTTTATAACTTTATCGTCAGACCAATTAGCTGTAAACATATAGTCAATAGATAAGTGCTTATGTAAAATGACTTTAGTT ATGTTCTAATTAAGTAGACA
Downstream 100 bases:
>100_bases AAGTATGAATTTTATTAAAAATCATCAAATATTAATAATTTCACTAACTATAGCAATAATTGTTTTATCAGTACTTGGTA TTTTTATGATTAAAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MIAVKDITDLNIQDIISQLTSEVINGDTTSSSAKFACEINSYIINYKLLNINLINTQLKNTKILYRKGLISKLDYEKYKR YCVICRLKNNIDEFILYFSTNYKDSQSLKIAIKELQNSCSSSLILELPHDYIRKIDVLLTSIDSAIQRSSDLNKTIIKQL NKLKSSLSRYIGYNNVLQKQEITINIKPINKNFELEDISFVSTRNKQYFKHNSLTLKNPHIEKLEVCENIYGINGWLTFD LAYINNHKDFNFLLSPNQPILFDIQINDSFNFYKKESKKDHHKRTTRFMAIGFNSNSIDIHENFEYSIYSYTKNVSSGVK KIKIQFHDPLKALWTKHKPSYIALNKSLDDIFKENFFFDNLVSLDTNKSNNLKIRIPQAFISTVNRNFYDFFIQQLEQNK CYLKYFCDKKSGKVSYHVVDQVDNDLQRNIVNSDEDLKDKLSPYDISCFKKQILISNKSNFYVKEKNICPDVTLTTQKKE DRKISDTLIKPFSSILKDNLQSVEYIQSNNDDIQEIITTGFEILLTSRNTLPFLDTEITLSKLDNDQNYLLGATDIKSLY ISQRKLLFKRSKYCSKQLYENLHNFHYKSDSESDVYEKIAFTKYPSLTHDNLITYKIKNYSNLTPEYPKYKSFSNFYING RVTIGENVNNDSKKAYKFFKNYKPEESSIAEFQENGEKGTSAILNSKADILYAIEIAKEMLSDKSSDKPIIYLPLKVNIN SANNQFIPLRNDDIILIEMQSFTKGEIIELISNSAISTKKAQQQLLQRQLLGSKENCEMAYTQTSDSETFSLTQVNEDCE NSFLINDKKGIFLRYKSKGN
Sequences:
>Translated_820_residues MIAVKDITDLNIQDIISQLTSEVINGDTTSSSAKFACEINSYIINYKLLNINLINTQLKNTKILYRKGLISKLDYEKYKR YCVICRLKNNIDEFILYFSTNYKDSQSLKIAIKELQNSCSSSLILELPHDYIRKIDVLLTSIDSAIQRSSDLNKTIIKQL NKLKSSLSRYIGYNNVLQKQEITINIKPINKNFELEDISFVSTRNKQYFKHNSLTLKNPHIEKLEVCENIYGINGWLTFD LAYINNHKDFNFLLSPNQPILFDIQINDSFNFYKKESKKDHHKRTTRFMAIGFNSNSIDIHENFEYSIYSYTKNVSSGVK KIKIQFHDPLKALWTKHKPSYIALNKSLDDIFKENFFFDNLVSLDTNKSNNLKIRIPQAFISTVNRNFYDFFIQQLEQNK CYLKYFCDKKSGKVSYHVVDQVDNDLQRNIVNSDEDLKDKLSPYDISCFKKQILISNKSNFYVKEKNICPDVTLTTQKKE DRKISDTLIKPFSSILKDNLQSVEYIQSNNDDIQEIITTGFEILLTSRNTLPFLDTEITLSKLDNDQNYLLGATDIKSLY ISQRKLLFKRSKYCSKQLYENLHNFHYKSDSESDVYEKIAFTKYPSLTHDNLITYKIKNYSNLTPEYPKYKSFSNFYING RVTIGENVNNDSKKAYKFFKNYKPEESSIAEFQENGEKGTSAILNSKADILYAIEIAKEMLSDKSSDKPIIYLPLKVNIN SANNQFIPLRNDDIILIEMQSFTKGEIIELISNSAISTKKAQQQLLQRQLLGSKENCEMAYTQTSDSETFSLTQVNEDCE NSFLINDKKGIFLRYKSKGN >Mature_820_residues MIAVKDITDLNIQDIISQLTSEVINGDTTSSSAKFACEINSYIINYKLLNINLINTQLKNTKILYRKGLISKLDYEKYKR YCVICRLKNNIDEFILYFSTNYKDSQSLKIAIKELQNSCSSSLILELPHDYIRKIDVLLTSIDSAIQRSSDLNKTIIKQL NKLKSSLSRYIGYNNVLQKQEITINIKPINKNFELEDISFVSTRNKQYFKHNSLTLKNPHIEKLEVCENIYGINGWLTFD LAYINNHKDFNFLLSPNQPILFDIQINDSFNFYKKESKKDHHKRTTRFMAIGFNSNSIDIHENFEYSIYSYTKNVSSGVK KIKIQFHDPLKALWTKHKPSYIALNKSLDDIFKENFFFDNLVSLDTNKSNNLKIRIPQAFISTVNRNFYDFFIQQLEQNK CYLKYFCDKKSGKVSYHVVDQVDNDLQRNIVNSDEDLKDKLSPYDISCFKKQILISNKSNFYVKEKNICPDVTLTTQKKE DRKISDTLIKPFSSILKDNLQSVEYIQSNNDDIQEIITTGFEILLTSRNTLPFLDTEITLSKLDNDQNYLLGATDIKSLY ISQRKLLFKRSKYCSKQLYENLHNFHYKSDSESDVYEKIAFTKYPSLTHDNLITYKIKNYSNLTPEYPKYKSFSNFYING RVTIGENVNNDSKKAYKFFKNYKPEESSIAEFQENGEKGTSAILNSKADILYAIEIAKEMLSDKSSDKPIIYLPLKVNIN SANNQFIPLRNDDIILIEMQSFTKGEIIELISNSAISTKKAQQQLLQRQLLGSKENCEMAYTQTSDSETFSLTQVNEDCE NSFLINDKKGIFLRYKSKGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95340; Mature: 95340
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVKDITDLNIQDIISQLTSEVINGDTTSSSAKFACEINSYIINYKLLNINLINTQLKN CEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEECCCCC TKILYRKGLISKLDYEKYKRYCVICRLKNNIDEFILYFSTNYKDSQSLKIAIKELQNSCS CEEEEHHCCHHHCCHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC SSLILELPHDYIRKIDVLLTSIDSAIQRSSDLNKTIIKQLNKLKSSLSRYIGYNNVLQKQ CCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE EITINIKPINKNFELEDISFVSTRNKQYFKHNSLTLKNPHIEKLEVCENIYGINGWLTFD EEEEEEEECCCCCCCCCEEEEECCCCHHEECCCEEECCCCCHHHHHHHHHCCCCCEEEEE LAYINNHKDFNFLLSPNQPILFDIQINDSFNFYKKESKKDHHKRTTRFMAIGFNSNSIDI EEEECCCCCEEEEECCCCCEEEEEEECCCCCHHHHHCCHHHHHHEEEEEEEEECCCEEEE HENFEYSIYSYTKNVSSGVKKIKIQFHDPLKALWTKHKPSYIALNKSLDDIFKENFFFDN ECCCCEEEEEEHHHHHCCCEEEEEEECCCHHHHHCCCCCCEEEECCCHHHHHHHCCCCCC LVSLDTNKSNNLKIRIPQAFISTVNRNFYDFFIQQLEQNKCYLKYFCDKKSGKVSYHVVD EEEECCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEHH QVDNDLQRNIVNSDEDLKDKLSPYDISCFKKQILISNKSNFYVKEKNICPDVTLTTQKKE HHCCHHHHHHCCCCHHHHHCCCCCCHHHHHHHHEEECCCCEEEEECCCCCCCEEECCCCC DRKISDTLIKPFSSILKDNLQSVEYIQSNNDDIQEIITTGFEILLTSRNTLPFLDTEITL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCEECCEEEE SKLDNDQNYLLGATDIKSLYISQRKLLFKRSKYCSKQLYENLHNFHYKSDSESDVYEKIA ECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH FTKYPSLTHDNLITYKIKNYSNLTPEYPKYKSFSNFYINGRVTIGENVNNDSKKAYKFFK HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHH NYKPEESSIAEFQENGEKGTSAILNSKADILYAIEIAKEMLSDKSSDKPIIYLPLKVNIN CCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEEEEEEE SANNQFIPLRNDDIILIEMQSFTKGEIIELISNSAISTKKAQQQLLQRQLLGSKENCEMA CCCCEEEEECCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE YTQTSDSETFSLTQVNEDCENSFLINDKKGIFLRYKSKGN EEECCCCCEEEEEECCCCCCCCEEEECCCCEEEEECCCCC >Mature Secondary Structure MIAVKDITDLNIQDIISQLTSEVINGDTTSSSAKFACEINSYIINYKLLNINLINTQLKN CEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEECCCCC TKILYRKGLISKLDYEKYKRYCVICRLKNNIDEFILYFSTNYKDSQSLKIAIKELQNSCS CEEEEHHCCHHHCCHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC SSLILELPHDYIRKIDVLLTSIDSAIQRSSDLNKTIIKQLNKLKSSLSRYIGYNNVLQKQ CCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE EITINIKPINKNFELEDISFVSTRNKQYFKHNSLTLKNPHIEKLEVCENIYGINGWLTFD EEEEEEEECCCCCCCCCEEEEECCCCHHEECCCEEECCCCCHHHHHHHHHCCCCCEEEEE LAYINNHKDFNFLLSPNQPILFDIQINDSFNFYKKESKKDHHKRTTRFMAIGFNSNSIDI EEEECCCCCEEEEECCCCCEEEEEEECCCCCHHHHHCCHHHHHHEEEEEEEEECCCEEEE HENFEYSIYSYTKNVSSGVKKIKIQFHDPLKALWTKHKPSYIALNKSLDDIFKENFFFDN ECCCCEEEEEEHHHHHCCCEEEEEEECCCHHHHHCCCCCCEEEECCCHHHHHHHCCCCCC LVSLDTNKSNNLKIRIPQAFISTVNRNFYDFFIQQLEQNKCYLKYFCDKKSGKVSYHVVD EEEECCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEHH QVDNDLQRNIVNSDEDLKDKLSPYDISCFKKQILISNKSNFYVKEKNICPDVTLTTQKKE HHCCHHHHHHCCCCHHHHHCCCCCCHHHHHHHHEEECCCCEEEEECCCCCCCEEECCCCC DRKISDTLIKPFSSILKDNLQSVEYIQSNNDDIQEIITTGFEILLTSRNTLPFLDTEITL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCEECCEEEE SKLDNDQNYLLGATDIKSLYISQRKLLFKRSKYCSKQLYENLHNFHYKSDSESDVYEKIA ECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH FTKYPSLTHDNLITYKIKNYSNLTPEYPKYKSFSNFYINGRVTIGENVNNDSKKAYKFFK HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHH NYKPEESSIAEFQENGEKGTSAILNSKADILYAIEIAKEMLSDKSSDKPIIYLPLKVNIN CCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEEEEEEE SANNQFIPLRNDDIILIEMQSFTKGEIIELISNSAISTKKAQQQLLQRQLLGSKENCEMA CCCCEEEEECCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE YTQTSDSETFSLTQVNEDCENSFLINDKKGIFLRYKSKGN EEECCCCCEEEEEECCCCCCCCEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA