Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256495
Identifier: 89256495
GI number: 89256495
Start: 1124519
End: 1125088
Strand: Reverse
Name: 89256495
Synonym: FTL_1173
Alternate gene names: NA
Gene position: 1125088-1124519 (Counterclockwise)
Preceding gene: 89256496
Following gene: 89256494
Centisome position: 59.34
GC content: 31.58
Gene sequence:
>570_bases ATGAAAACATTTATTGAAAATGACCTAATTAAAGCTCTAAGTGCTATAGAACTAATGGGAATAGCTATAACTATAATTGC CGCATTCTATTTCCAATTTACAATGGATGAACTTCCTTGTCCTTTATGCTTACTACAACGATTAGGATTATTAGCAATCG GATTTGGTTTTTTACTTAATATGCGCTTTAATATACGTCCTAGTCATTATGCATTATCACTACTAGCAGCAGTATTTACA TCTTTTGTTTCCCTTAGACAAATCGCCTTACATGTAACAGATCCAGTTGGCTTTGGCTCAAAAGTTTTAGGTATGCATAT GTACAGCTGGGTATTTGTAATATCTATGATCGCTATAATTTATATTGCTATAGTTATATCATATCCTAGGCAATATGAAT TACGCAGACAGCCTCAACAAATATCTGAGGCAAAAAATAATATTATACGTCTCTTCATCCAAATCATATTTATAATCTTT CTTCTAGTTGTATTTGCTAATGTAGTTTCAACATTTTTTGAATGTGGTTTACATGAATGTCCGGATGATCCAACAAGATA TCTATTCTAA
Upstream 100 bases:
>100_bases TAATTACATTTAGTATTTTTTTAATAGTTGCTGGACTTGTATTTTTACATCACGCAACAAATCACTTATCTATCTACTTA TAATTATGAAGGAGCAAAAT
Downstream 100 bases:
>100_bases AAAATCATATTTAAATCCTAACACAATTATTTTTATCTAAATATTTGTTCCCCGCTTGATCAATAAGAGTTGGACAACTA TAGTGATTACTACAAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKTFIENDLIKALSAIELMGIAITIIAAFYFQFTMDELPCPLCLLQRLGLLAIGFGFLLNMRFNIRPSHYALSLLAAVFT SFVSLRQIALHVTDPVGFGSKVLGMHMYSWVFVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIF LLVVFANVVSTFFECGLHECPDDPTRYLF
Sequences:
>Translated_189_residues MKTFIENDLIKALSAIELMGIAITIIAAFYFQFTMDELPCPLCLLQRLGLLAIGFGFLLNMRFNIRPSHYALSLLAAVFT SFVSLRQIALHVTDPVGFGSKVLGMHMYSWVFVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIF LLVVFANVVSTFFECGLHECPDDPTRYLF >Mature_189_residues MKTFIENDLIKALSAIELMGIAITIIAAFYFQFTMDELPCPLCLLQRLGLLAIGFGFLLNMRFNIRPSHYALSLLAAVFT SFVSLRQIALHVTDPVGFGSKVLGMHMYSWVFVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIF LLVVFANVVSTFFECGLHECPDDPTRYLF
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21611; Mature: 21611
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFIENDLIKALSAIELMGIAITIIAAFYFQFTMDELPCPLCLLQRLGLLAIGFGFLLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MRFNIRPSHYALSLLAAVFTSFVSLRQIALHVTDPVGFGSKVLGMHMYSWVFVISMIAII HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH YIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVSTFFECGLHEC HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDDPTRYLF CCCCCCCCC >Mature Secondary Structure MKTFIENDLIKALSAIELMGIAITIIAAFYFQFTMDELPCPLCLLQRLGLLAIGFGFLLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MRFNIRPSHYALSLLAAVFTSFVSLRQIALHVTDPVGFGSKVLGMHMYSWVFVISMIAII HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH YIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVSTFFECGLHEC HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDDPTRYLF CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA