| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256482
Identifier: 89256482
GI number: 89256482
Start: 1100246
End: 1101442
Strand: Direct
Name: 89256482
Synonym: FTL_1160
Alternate gene names: NA
Gene position: 1100246-1101442 (Clockwise)
Preceding gene: 89256481
Following gene: 89256497
Centisome position: 58.03
GC content: 29.24
Gene sequence:
>1197_bases ATGTTTCTAGAAAGGATTTATTGGGAAGATGGTTTAAGATTAGATAGCGATATTTTAGATAAGTCAAATCTATCTGTTTT AGAAAGGTTAAGCACCGCGAGCTATTTGCCAGCTAATCTTAATAAGGGAATCGTTAGCTTTGATTTAGATGTTGAAAGTT TGCAGACAGGTCTTATCCTTATAAAAGATCTTAAATTGTACTTAGATGAAAAAAATTTTGTTTTTTATGATAAGTCTTAT CCGTTATCTTTACAAATAATGACTGATAAGTTAAGTGATGAAATCCCCTTATTTCTGAATATCAGAGAGAAAGTAATTGA AAAAAATGGGATTAAATATATCTATAATCAATTGTCATTATCATTAGAGCATAGCTATGGTTTTAAACATAGCATCCAAA TTGCATTATTTAGGTTAGATAGAGGGCGATTAGTACCAGAAATTTATGACTTCCCGCTATTAACTCTTAATCATTATTAT TTAGGTGATATTTTTGTAAAACTTAATAGGACTGTTTCTGAACTAAAGTCTTTTAATCGCTTTGTTTTTTCAGCTTCAAG ATCTTATGCGTCAATATTACTTGTATTTTTGATTAATAAATTAGAAAGAGAATTGAAGTTCGCAGAATCTAATAGGGCAA ATAGTTCCCCGAAACAAATATTTGATTTAATTGATGATATTTACAGCTTAATTCAACTTAACCTAGATAAAGTTGAAGAG CTTGATAGCATTGAATTTGATTTCCAAAAGCCTTTGACTAAATTAAATCTACTTGCTGATAGATTATTAACTCTTTGTGA GTATAGAAAGATTAATAACTTTATCAGATTTGAATTGCATGGAAAAAAATATATATGTGAAAGCTTTCCTGAAGAGTTTT TTGTTGCTACTAGATACTATCTTTTCCTTAAAAGGAAAGCAACAGCTCCAGCCAATGTAAGGTTTGAAAATAAGAATGCT CTGAGAATTACTAGTATAAGTAGAAATAAGAATATTGTAGCTCTGTCTCTTTCAGGAGTAAAACTGGTTGACGTTGAATG TTCTATGATTAATTTTACAACTAGATTTGATAATATTGATGCAATATATGAAATTCAAAAAGGTTCTGAGTGGGATTTTA TATTAGCGGATAGTAGTGCGGTTTTTACGGCTTTTGAAGGTAGTGAGAATTTTGATTTCTTTATAGCCTTTTCTTAA
Upstream 100 bases:
>100_bases CTCAAGGAAGCTTGCCAGTATGTTGCGCAGCTAGCACAGATAAAGGAGTTGCTAAAATAGGATATATTGCAGCTGCATAG TAAGATCGGAGTTGATTCTA
Downstream 100 bases:
>100_bases CTAGAGTTATATTATAGTAATTTTCTTTTCATAATGAGGAGGAGCCCAGCCATCAGCTATACGTTCGAGATTTACTCTTA GAAAATTACCTTTATCATAA
Product: intracellular growth locus, subunit D
Products: NA
Alternate protein names: Intracellular Growth Locus; Intracellular Growth Locus Subunit D
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MFLERIYWEDGLRLDSDILDKSNLSVLERLSTASYLPANLNKGIVSFDLDVESLQTGLILIKDLKLYLDEKNFVFYDKSY PLSLQIMTDKLSDEIPLFLNIREKVIEKNGIKYIYNQLSLSLEHSYGFKHSIQIALFRLDRGRLVPEIYDFPLLTLNHYY LGDIFVKLNRTVSELKSFNRFVFSASRSYASILLVFLINKLERELKFAESNRANSSPKQIFDLIDDIYSLIQLNLDKVEE LDSIEFDFQKPLTKLNLLADRLLTLCEYRKINNFIRFELHGKKYICESFPEEFFVATRYYLFLKRKATAPANVRFENKNA LRITSISRNKNIVALSLSGVKLVDVECSMINFTTRFDNIDAIYEIQKGSEWDFILADSSAVFTAFEGSENFDFFIAFS
Sequences:
>Translated_398_residues MFLERIYWEDGLRLDSDILDKSNLSVLERLSTASYLPANLNKGIVSFDLDVESLQTGLILIKDLKLYLDEKNFVFYDKSY PLSLQIMTDKLSDEIPLFLNIREKVIEKNGIKYIYNQLSLSLEHSYGFKHSIQIALFRLDRGRLVPEIYDFPLLTLNHYY LGDIFVKLNRTVSELKSFNRFVFSASRSYASILLVFLINKLERELKFAESNRANSSPKQIFDLIDDIYSLIQLNLDKVEE LDSIEFDFQKPLTKLNLLADRLLTLCEYRKINNFIRFELHGKKYICESFPEEFFVATRYYLFLKRKATAPANVRFENKNA LRITSISRNKNIVALSLSGVKLVDVECSMINFTTRFDNIDAIYEIQKGSEWDFILADSSAVFTAFEGSENFDFFIAFS >Mature_398_residues MFLERIYWEDGLRLDSDILDKSNLSVLERLSTASYLPANLNKGIVSFDLDVESLQTGLILIKDLKLYLDEKNFVFYDKSY PLSLQIMTDKLSDEIPLFLNIREKVIEKNGIKYIYNQLSLSLEHSYGFKHSIQIALFRLDRGRLVPEIYDFPLLTLNHYY LGDIFVKLNRTVSELKSFNRFVFSASRSYASILLVFLINKLERELKFAESNRANSSPKQIFDLIDDIYSLIQLNLDKVEE LDSIEFDFQKPLTKLNLLADRLLTLCEYRKINNFIRFELHGKKYICESFPEEFFVATRYYLFLKRKATAPANVRFENKNA LRITSISRNKNIVALSLSGVKLVDVECSMINFTTRFDNIDAIYEIQKGSEWDFILADSSAVFTAFEGSENFDFFIAFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46402; Mature: 46402
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLERIYWEDGLRLDSDILDKSNLSVLERLSTASYLPANLNKGIVSFDLDVESLQTGLIL CCCHHEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCEEE IKDLKLYLDEKNFVFYDKSYPLSLQIMTDKLSDEIPLFLNIREKVIEKNGIKYIYNQLSL EEEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHCCHHHEEHHHEE SLEHSYGFKHSIQIALFRLDRGRLVPEIYDFPLLTLNHYYLGDIFVKLNRTVSELKSFNR EEECCCCCCEEEEEEEEEECCCCCCCHHHCCCEEEECCEEEEEEEEEEHHHHHHHHHHHH FVFSASRSYASILLVFLINKLERELKFAESNRANSSPKQIFDLIDDIYSLIQLNLDKVEE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH LDSIEFDFQKPLTKLNLLADRLLTLCEYRKINNFIRFELHGKKYICESFPEEFFVATRYY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEHHHHCCHHHHHHHHEE LFLKRKATAPANVRFENKNALRITSISRNKNIVALSLSGVKLVDVECSMINFTTRFDNID EEEEECCCCCCCEEECCCCEEEEEEECCCCCEEEEEECCEEEEEEEEEEEEEEECCCCCC AIYEIQKGSEWDFILADSSAVFTAFEGSENFDFFIAFS EEEEECCCCCCCEEEECCCEEEEEECCCCCEEEEEEEC >Mature Secondary Structure MFLERIYWEDGLRLDSDILDKSNLSVLERLSTASYLPANLNKGIVSFDLDVESLQTGLIL CCCHHEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCEEE IKDLKLYLDEKNFVFYDKSYPLSLQIMTDKLSDEIPLFLNIREKVIEKNGIKYIYNQLSL EEEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHCCHHHEEHHHEE SLEHSYGFKHSIQIALFRLDRGRLVPEIYDFPLLTLNHYYLGDIFVKLNRTVSELKSFNR EEECCCCCCEEEEEEEEEECCCCCCCHHHCCCEEEECCEEEEEEEEEEHHHHHHHHHHHH FVFSASRSYASILLVFLINKLERELKFAESNRANSSPKQIFDLIDDIYSLIQLNLDKVEE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH LDSIEFDFQKPLTKLNLLADRLLTLCEYRKINNFIRFELHGKKYICESFPEEFFVATRYY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEHHHHCCHHHHHHHHEE LFLKRKATAPANVRFENKNALRITSISRNKNIVALSLSGVKLVDVECSMINFTTRFDNID EEEEECCCCCCCEEECCCCEEEEEEECCCCCEEEEEECCEEEEEEEEEEEEEEECCCCCC AIYEIQKGSEWDFILADSSAVFTAFEGSENFDFFIAFS EEEEECCCCCCCEEEECCCEEEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA