| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256481
Identifier: 89256481
GI number: 89256481
Start: 1099596
End: 1100225
Strand: Direct
Name: 89256481
Synonym: FTL_1159
Alternate gene names: NA
Gene position: 1099596-1100225 (Clockwise)
Preceding gene: 89256480
Following gene: 89256482
Centisome position: 58.0
GC content: 34.6
Gene sequence:
>630_bases ATGAGTGAGATGATAACAAGACAACAGGTAACAAGTGGCGAGACCATTCATGTGAGAACTGATCCTACTGCATGTATAGG ATCTCATCCTAATTGTAGATTATTTATTGATTCTTTAACTATAGCTGGGGAGAAACTTGATAAAAATATCGTTGCTATAG AGGGTGGAGAGGATGTCACGAAAGCTGATTCGGCTACAGCTGCTGCTAGTGTAATACGTTTATCTATAACGCCAGGCTCT ATAAATCCAACAATAAGTATTACTCTTGGTGTTCTAATTAAATCAAATGTTAGAACTAAAATTGAAGAGAAAGTTTCGAG TATATTACAAGCAAGTGCTACAGATATGAAAATTAAGTTAGGTAATTCTAATAAAAAACAAGAGTATAAAACTGATGAAG CATGGGGTATTATGATAGATCTATCTAATTTAGAGTTATATCCAATAAGTGCTAAGGCTTTTAGTATTAGTATAGAGCCA ACAGAACTTATGGGTGTTTCAAAAGATGGAATGAGTTATCATATTATATCTATAGATGGTCTTACAACATCTCAAGGAAG CTTGCCAGTATGTTGCGCAGCTAGCACAGATAAAGGAGTTGCTAAAATAGGATATATTGCAGCTGCATAG
Upstream 100 bases:
>100_bases CACATTCAATTTGAAGGAATGAATACTACAATGACTATAGATACTAGGCTTGAACCAGAATTATTCGGTACAAATAATAA CTAAAAAAAGGAGAATGATT
Downstream 100 bases:
>100_bases TAAGATCGGAGTTGATTCTAATGTTTCTAGAAAGGATTTATTGGGAAGATGGTTTAAGATTAGATAGCGATATTTTAGAT AAGTCAAATCTATCTGTTTT
Product: intracellular growth locus, subunit C
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSEMITRQQVTSGETIHVRTDPTACIGSHPNCRLFIDSLTIAGEKLDKNIVAIEGGEDVTKADSATAAASVIRLSITPGS INPTISITLGVLIKSNVRTKIEEKVSSILQASATDMKIKLGNSNKKQEYKTDEAWGIMIDLSNLELYPISAKAFSISIEP TELMGVSKDGMSYHIISIDGLTTSQGSLPVCCAASTDKGVAKIGYIAAA
Sequences:
>Translated_209_residues MSEMITRQQVTSGETIHVRTDPTACIGSHPNCRLFIDSLTIAGEKLDKNIVAIEGGEDVTKADSATAAASVIRLSITPGS INPTISITLGVLIKSNVRTKIEEKVSSILQASATDMKIKLGNSNKKQEYKTDEAWGIMIDLSNLELYPISAKAFSISIEP TELMGVSKDGMSYHIISIDGLTTSQGSLPVCCAASTDKGVAKIGYIAAA >Mature_208_residues SEMITRQQVTSGETIHVRTDPTACIGSHPNCRLFIDSLTIAGEKLDKNIVAIEGGEDVTKADSATAAASVIRLSITPGSI NPTISITLGVLIKSNVRTKIEEKVSSILQASATDMKIKLGNSNKKQEYKTDEAWGIMIDLSNLELYPISAKAFSISIEPT ELMGVSKDGMSYHIISIDGLTTSQGSLPVCCAASTDKGVAKIGYIAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22134; Mature: 22002
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMITRQQVTSGETIHVRTDPTACIGSHPNCRLFIDSLTIAGEKLDKNIVAIEGGEDVT CCCHHCHHHCCCCCEEEEECCCCCEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCC KADSATAAASVIRLSITPGSINPTISITLGVLIKSNVRTKIEEKVSSILQASATDMKIKL CCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEE GNSNKKQEYKTDEAWGIMIDLSNLELYPISAKAFSISIEPTELMGVSKDGMSYHIISIDG CCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEEEECCHHHEEECCCCCEEEEEEECC LTTSQGSLPVCCAASTDKGVAKIGYIAAA EEECCCCCCEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure SEMITRQQVTSGETIHVRTDPTACIGSHPNCRLFIDSLTIAGEKLDKNIVAIEGGEDVT CCHHCHHHCCCCCEEEEECCCCCEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCC KADSATAAASVIRLSITPGSINPTISITLGVLIKSNVRTKIEEKVSSILQASATDMKIKL CCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEE GNSNKKQEYKTDEAWGIMIDLSNLELYPISAKAFSISIEPTELMGVSKDGMSYHIISIDG CCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEEEECCHHHEEECCCCCEEEEEEECC LTTSQGSLPVCCAASTDKGVAKIGYIAAA EEECCCCCCEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA