| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256480
Identifier: 89256480
GI number: 89256480
Start: 1098059
End: 1099579
Strand: Direct
Name: 89256480
Synonym: FTL_1158
Alternate gene names: NA
Gene position: 1098059-1099579 (Clockwise)
Preceding gene: 89256479
Following gene: 89256481
Centisome position: 57.91
GC content: 31.03
Gene sequence:
>1521_bases ATGACAATAAATAAATTAAGTCTCACTGATGAACTTTTAAATAATTTTGGGGGATCTACAGAAGTTGATAGTGTACTCAA AAATATAGATTTTGATGTTTCAGATGATGCTTCTAAAGTTTTATCTTTATCTACTGACTACAATGCTAGAAACCTTATGG CGCTATCTTTGGTATTAGCAAATAATGATAATATAAATAATTATAATCAAAAATATATCCAGAAAGTTATTACAGTTATT GATAGGCTTATTGATTTACAAGTTAATTCTATTATATCTAATGATGAGTTTAGAGCACTTGAGCAAGAATGGCTAAAGGT GCAAGAGGTTTGTCAAGAAGACTATGATAATGTTGAAGTAAGTATATTAGATGTAAAAAAAGAAGAGCTACAATATGATT TCGAGAGAAATTTATATGATATATCTAGTAGTGACTTTTTCAAAAAAGTTTACGTTTCAGAATTTGATCAATATGGTGGA GAACCTTATGGCGCAATATTAGGATTGTATAATTTTGAAAATACCACAAATGATATAATTTGGTTGACTGGAATGGGTAT GGTGGCAAAGAATTCTCATGCACCATTTATTGCATCAATTGATAAGTCATTCTTTGGTGTTAAGGATTTATCAGAAATCA CTCATATAAAAAGTTTTGAAGCTTTGCTTGAGCATCCTAGATATAAAGAGTGGAATGATTTTAGAAACCTTGATGTTGCT GCATATATAGGTTTGACCGTAGGTGATTTTATGTTGCGGCAACCATATAATCCTGAGAATAATCCAGTTCAGTATAAACT TATGGAAGGCTTTAATGAGTTTGTTGATTATGATAAGAATGAAAGTTATCTATGGGGACCTGCTTCAATTCATCTAGTTA AGAATATGATGAGATCTTATGATAAAACTAGATGGTTCCAATATATAAGAGGAGTTGAGAGTGGTGGTTATGTAAAGAAC TTGGTAGCTTGCGTATATGATAATAAAGGCATTCTAGAAACTAAGTCACCTTTAAATGTATTATTTGCTGATTATATGGA GTTATCACTTGCAAATATTGGTTTAATACCATTTGTAAGTGAAAAAGGTACTAGTAATGCTTGTTTTTTTAGTGTAAATT CTGCTAAAAAAGTCGAAGAATTTGTAGATGGATTTGACTCAGCAAACTCAAGATTAATTGCTAACCTTTCTTACACTATG TGTATATCGAGAATATCTCATTATATTAAATGTGTAATTAGAGATAAGATTGGTAGTATTGTGGATGTCGAGTCGATTCA AAAAATTCTTTCTGATTGGATATCAGAATTTGTCACCACAGTCTATCAACCAACCCCTTTAGAAATGGCGAGATATCCTT TCAGAAACGTTTCTATCGAGGTTAAAACCATACCGGGTAAGCCTGGCTGGTATTCATGCAAAATAAATGTAATTCCCCAC ATTCAATTTGAAGGAATGAATACTACAATGACTATAGATACTAGGCTTGAACCAGAATTATTCGGTACAAATAATAACTA A
Upstream 100 bases:
>100_bases CCTGCTTTGACAAATTATACGATTAAAGACTCTTGTGATGCTGCTGGGTCTCAAGACTTAAGTAATCAACAAGTAGATGG TAAGTAGGGAGGATTTTATT
Downstream 100 bases:
>100_bases AAAAAGGAGAATGATTATGAGTGAGATGATAACAAGACAACAGGTAACAAGTGGCGAGACCATTCATGTGAGAACTGATC CTACTGCATGTATAGGATCT
Product: intracellular growth locus, subunit B
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MTINKLSLTDELLNNFGGSTEVDSVLKNIDFDVSDDASKVLSLSTDYNARNLMALSLVLANNDNINNYNQKYIQKVITVI DRLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGG EPYGAILGLYNFENTTNDIIWLTGMGMVAKNSHAPFIASIDKSFFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVA AYIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSYDKTRWFQYIRGVESGGYVKN LVACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVSEKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTM CISRISHYIKCVIRDKIGSIVDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPH IQFEGMNTTMTIDTRLEPELFGTNNN
Sequences:
>Translated_506_residues MTINKLSLTDELLNNFGGSTEVDSVLKNIDFDVSDDASKVLSLSTDYNARNLMALSLVLANNDNINNYNQKYIQKVITVI DRLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGG EPYGAILGLYNFENTTNDIIWLTGMGMVAKNSHAPFIASIDKSFFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVA AYIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSYDKTRWFQYIRGVESGGYVKN LVACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVSEKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTM CISRISHYIKCVIRDKIGSIVDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPH IQFEGMNTTMTIDTRLEPELFGTNNN >Mature_505_residues TINKLSLTDELLNNFGGSTEVDSVLKNIDFDVSDDASKVLSLSTDYNARNLMALSLVLANNDNINNYNQKYIQKVITVID RLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGGE PYGAILGLYNFENTTNDIIWLTGMGMVAKNSHAPFIASIDKSFFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVAA YIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSYDKTRWFQYIRGVESGGYVKNL VACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVSEKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTMC ISRISHYIKCVIRDKIGSIVDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPHI QFEGMNTTMTIDTRLEPELFGTNNN
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57918; Mature: 57787
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINKLSLTDELLNNFGGSTEVDSVLKNIDFDVSDDASKVLSLSTDYNARNLMALSLVLA CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCEEEEEEEEE NNDNINNYNQKYIQKVITVIDRLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEE SILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGGEPYGAILGLYNFENTTNDII EEEECCHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCEE WLTGMGMVAKNSHAPFIASIDKSFFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVA EEECCCEEECCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEE AYIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSY EEEHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHH DKTRWFQYIRGVESGGYVKNLVACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVS HHHHHHHHHHCCCCCCHHHHHHHHEECCCCCEECCCCHHHHHHHHHHHHHHHCCEEEEEC EKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTMCISRISHYIKCVIRDKIGSI CCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE VDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPH ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEEEE IQFEGMNTTMTIDTRLEPELFGTNNN EEECCCCEEEEEECCCCCEECCCCCC >Mature Secondary Structure TINKLSLTDELLNNFGGSTEVDSVLKNIDFDVSDDASKVLSLSTDYNARNLMALSLVLA CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCEEEEEEEEE NNDNINNYNQKYIQKVITVIDRLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEE SILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGGEPYGAILGLYNFENTTNDII EEEECCHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCEE WLTGMGMVAKNSHAPFIASIDKSFFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVA EEECCCEEECCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEE AYIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSY EEEHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHH DKTRWFQYIRGVESGGYVKNLVACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVS HHHHHHHHHHCCCCCCHHHHHHHHEECCCCCEECCCCHHHHHHHHHHHHHHHCCEEEEEC EKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTMCISRISHYIKCVIRDKIGSI CCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE VDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPH ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEEEE IQFEGMNTTMTIDTRLEPELFGTNNN EEECCCCEEEEEECCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA