Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256422
Identifier: 89256422
GI number: 89256422
Start: 1036686
End: 1037039
Strand: Reverse
Name: 89256422
Synonym: FTL_1088
Alternate gene names: NA
Gene position: 1037039-1036686 (Counterclockwise)
Preceding gene: 89256423
Following gene: 89256421
Centisome position: 54.7
GC content: 39.27
Gene sequence:
>354_bases ATGAGCAAATGTAAAACACACCAAAACCACGAACATAAACACCAAGATGATTGTGGTCATACCAAAATAAAACATGGCGA TCACTACGACTACCTACATGATGGTCACCTTCATCATGAGCACAATGGTCACTATGATGAACATATCCTAGAAGTAACAG AAAAGAACCCAGATGGCTGTCATCCAATCAAAGAAGATTGCTCTAGTCATGTCCATGGACCTAACTGCGGTCATGAAGCA GTACCACATGGTGATCACATAGACTATATTGTTGATGGTAGATTACACCACCCTCATGGTGATCATTGTGATGATCACGG ACCGGTAGAAGTAATTAAAAATGATAAAAAATAA
Upstream 100 bases:
>100_bases AAATTTGTCTATTTTGCTAAGTTACAAATCATCGTACAATTGATGTTTTTTATAATAAGTATTAAGATTGTAATATCAGC AAAGCCAAAGGATAATCAAT
Downstream 100 bases:
>100_bases TAGGTTCTGTGCACAAAAAACTTAAATTATATTGAAAATAGCTAAACTGCTGTTATTTAAGATTTGAAAAGCAATAAATA TCAATGGTTTAGCAAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSKCKTHQNHEHKHQDDCGHTKIKHGDHYDYLHDGHLHHEHNGHYDEHILEVTEKNPDGCHPIKEDCSSHVHGPNCGHEA VPHGDHIDYIVDGRLHHPHGDHCDDHGPVEVIKNDKK
Sequences:
>Translated_117_residues MSKCKTHQNHEHKHQDDCGHTKIKHGDHYDYLHDGHLHHEHNGHYDEHILEVTEKNPDGCHPIKEDCSSHVHGPNCGHEA VPHGDHIDYIVDGRLHHPHGDHCDDHGPVEVIKNDKK >Mature_116_residues SKCKTHQNHEHKHQDDCGHTKIKHGDHYDYLHDGHLHHEHNGHYDEHILEVTEKNPDGCHPIKEDCSSHVHGPNCGHEAV PHGDHIDYIVDGRLHHPHGDHCDDHGPVEVIKNDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13446; Mature: 13314
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKCKTHQNHEHKHQDDCGHTKIKHGDHYDYLHDGHLHHEHNGHYDEHILEVTEKNPDGC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC HPIKEDCSSHVHGPNCGHEAVPHGDHIDYIVDGRLHHPHGDHCDDHGPVEVIKNDKK CCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure SKCKTHQNHEHKHQDDCGHTKIKHGDHYDYLHDGHLHHEHNGHYDEHILEVTEKNPDGC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC HPIKEDCSSHVHGPNCGHEAVPHGDHIDYIVDGRLHHPHGDHCDDHGPVEVIKNDKK CCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA