Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256410
Identifier: 89256410
GI number: 89256410
Start: 1027970
End: 1028560
Strand: Reverse
Name: 89256410
Synonym: FTL_1075
Alternate gene names: NA
Gene position: 1028560-1027970 (Counterclockwise)
Preceding gene: 89256413
Following gene: 89256395
Centisome position: 54.25
GC content: 30.12
Gene sequence:
>591_bases GTGGATCTAAAAGAATTTAAAAAGATAGAGCTTTCTCACTTTAAAGATGCTAAATCAGTTAATTACCTAAGAGATGATGT TAATCACCTTCTATATTTAGATAGTCCAGCTTTAGATGTGTTTCGTGACTATAAAGAGCATGATGCTTTAGTAGTCAAAG CAGATGTAAACTTAAAAGATGTAAAAACTAAACTGATAGATAATCATAAAGATTTTATTCTTGTAACTGATGGAGAGGAC AAAGTTATTGGCAGTATTGCTTTACACTACATACAAAGCCAAGCGTTAAATGAAAGAGCTAGAAGTTCGGGCACAAAGCC TGCGGACTTAATAGCAAATGATATTATGCTGCCAATAGCTAAAGCTAATGTTGTTTCTTTTTCAATTATTGAAAACTCAA AAATAGGTCATGTAGTCAATACTTTGATTAATTCAGATTATCATCACATCATAGTTTATGATAAAGACAAGAATGGTGAA AAATATATTCGAGGTTACTTCTCTTTACCTTATATTAGAAGAAAGCTTAGCCTAGATGTATATCATGTTTATCAAAAACA AGGAATTTCTAATTTAAATAGAGGTATTTAA
Upstream 100 bases:
>100_bases TCATCATCTAATAAATAATATATGATAAGCTTTGAAAAAGACAAATATTTTGTCTAAAATCTAATTATGAAATCTAGATT GATATACGGAGAGAATTCCT
Downstream 100 bases:
>100_bases GCTTATATATTATTTTTGAGCTAGATATTTATCAATAACATCATAAAACTCTTTAGCCATAATGTTATAGCCTTTTGCGT TAGGATGTACTGCATCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDLKEFKKIELSHFKDAKSVNYLRDDVNHLLYLDSPALDVFRDYKEHDALVVKADVNLKDVKTKLIDNHKDFILVTDGED KVIGSIALHYIQSQALNERARSSGTKPADLIANDIMLPIAKANVVSFSIIENSKIGHVVNTLINSDYHHIIVYDKDKNGE KYIRGYFSLPYIRRKLSLDVYHVYQKQGISNLNRGI
Sequences:
>Translated_196_residues MDLKEFKKIELSHFKDAKSVNYLRDDVNHLLYLDSPALDVFRDYKEHDALVVKADVNLKDVKTKLIDNHKDFILVTDGED KVIGSIALHYIQSQALNERARSSGTKPADLIANDIMLPIAKANVVSFSIIENSKIGHVVNTLINSDYHHIIVYDKDKNGE KYIRGYFSLPYIRRKLSLDVYHVYQKQGISNLNRGI >Mature_196_residues MDLKEFKKIELSHFKDAKSVNYLRDDVNHLLYLDSPALDVFRDYKEHDALVVKADVNLKDVKTKLIDNHKDFILVTDGED KVIGSIALHYIQSQALNERARSSGTKPADLIANDIMLPIAKANVVSFSIIENSKIGHVVNTLINSDYHHIIVYDKDKNGE KYIRGYFSLPYIRRKLSLDVYHVYQKQGISNLNRGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22457; Mature: 22457
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKEFKKIELSHFKDAKSVNYLRDDVNHLLYLDSPALDVFRDYKEHDALVVKADVNLKD CCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCEEEEECCCHHH VKTKLIDNHKDFILVTDGEDKVIGSIALHYIQSQALNERARSSGTKPADLIANDIMLPIA HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEE KANVVSFSIIENSKIGHVVNTLINSDYHHIIVYDKDKNGEKYIRGYFSLPYIRRKLSLDV CCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHH YHVYQKQGISNLNRGI HHHHHHHCCCHHHCCC >Mature Secondary Structure MDLKEFKKIELSHFKDAKSVNYLRDDVNHLLYLDSPALDVFRDYKEHDALVVKADVNLKD CCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCEEEEECCCHHH VKTKLIDNHKDFILVTDGEDKVIGSIALHYIQSQALNERARSSGTKPADLIANDIMLPIA HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEE KANVVSFSIIENSKIGHVVNTLINSDYHHIIVYDKDKNGEKYIRGYFSLPYIRRKLSLDV CCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHH YHVYQKQGISNLNRGI HHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA