Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is yozG [H]
Identifier: 89256413
GI number: 89256413
Start: 1031796
End: 1031999
Strand: Reverse
Name: yozG [H]
Synonym: FTL_1079
Alternate gene names: 89256413
Gene position: 1031999-1031796 (Counterclockwise)
Preceding gene: 89256414
Following gene: 89256410
Centisome position: 54.43
GC content: 25.49
Gene sequence:
>204_bases ATGGCTATAAAAATTGATTTAGCAAAAATAATGGTTGATAAACAAATAAAATCAAAAGACTTAGCTAGAGCTATTGGAAT TACAGAGCAAAATTTATCGATATTAAAAAATGGAAAAGCAAAAGCAATTAGATTTTCTACATTAGAAGCAATATGCAAAT ATCTTGAATGTCAACCTGGAGATATTTTAGTATATAAAAGCTAA
Upstream 100 bases:
>100_bases TACTATGTGGAGGTGTTATTATAACTATTTCAAAAGTTATGCAAAAAGCTCATGAAATTGCAGAAGAAAATGATTTAACA ATTTAAGGATAACCCCAAAA
Downstream 100 bases:
>100_bases TGCTTATGTAAACTTATAGGAGTAATATTATCATCTAGAGTTGTTTCATTATATAAAAGATTAGGTTGGACTATAATATG TTGGACTATAGCTGGATTAA
Product: helix-turn-helix family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MAIKIDLAKIMVDKQIKSKDLARAIGITEQNLSILKNGKAKAIRFSTLEAICKYLECQPGDILVYKS
Sequences:
>Translated_67_residues MAIKIDLAKIMVDKQIKSKDLARAIGITEQNLSILKNGKAKAIRFSTLEAICKYLECQPGDILVYKS >Mature_66_residues AIKIDLAKIMVDKQIKSKDLARAIGITEQNLSILKNGKAKAIRFSTLEAICKYLECQPGDILVYKS
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 7453; Mature: 7322
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKIDLAKIMVDKQIKSKDLARAIGITEQNLSILKNGKAKAIRFSTLEAICKYLECQPG CEEEEEHHHHHHHCCCCHHHHHHHHCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCCC DILVYKS CEEEEEC >Mature Secondary Structure AIKIDLAKIMVDKQIKSKDLARAIGITEQNLSILKNGKAKAIRFSTLEAICKYLECQPG EEEEEHHHHHHHCCCCHHHHHHHHCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCCC DILVYKS CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]