Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256394
Identifier: 89256394
GI number: 89256394
Start: 1013299
End: 1013583
Strand: Reverse
Name: 89256394
Synonym: FTL_1059
Alternate gene names: NA
Gene position: 1013583-1013299 (Counterclockwise)
Preceding gene: 89256395
Following gene: 89256393
Centisome position: 53.46
GC content: 28.77
Gene sequence:
>285_bases ATGTCTGAAAGTAATAATCACAATCAACAAGAAACTTTTTTTGAGTTTCCTTGCCAATTTCCAATAAAAATAATGGCAAA TCCTCAGAAAGAAACTGTTGAGTTTATTCTAAGTGTTTTTGAGAAATATGTACCAAATCATAGTGAAATAGACTTTAATA CCAAAGAAAGTAAAACTGGTAAATATATTTCTATAACTGCGATTTTTACCGCAGATAGTAAAGAACAGCTAGATAATATC TACAAAGAAATTTCAGCACATCCAGAAGTTCACATGGTTTTATAA
Upstream 100 bases:
>100_bases CTAAGGAGGAAATTGCTAGTATACCTGTAGTTGCTATGAATAATGTTTCACAAAAAGGTTGGTGGTAATAACCACAGAAT TTGTAATTAAGGATTTATAA
Downstream 100 bases:
>100_bases AATTTTGTTATGAATAATATTTACCAAAAAGACTTGGGTTTACAACAATATACCAAAGTGTTTGAGGATATGCTTGAGTT TACTTCAACACGAACTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSESNNHNQQETFFEFPCQFPIKIMANPQKETVEFILSVFEKYVPNHSEIDFNTKESKTGKYISITAIFTADSKEQLDNI YKEISAHPEVHMVL
Sequences:
>Translated_94_residues MSESNNHNQQETFFEFPCQFPIKIMANPQKETVEFILSVFEKYVPNHSEIDFNTKESKTGKYISITAIFTADSKEQLDNI YKEISAHPEVHMVL >Mature_93_residues SESNNHNQQETFFEFPCQFPIKIMANPQKETVEFILSVFEKYVPNHSEIDFNTKESKTGKYISITAIFTADSKEQLDNIY KEISAHPEVHMVL
Specific function: Unknown
COG id: COG2921
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0250 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007454 [H]
Pfam domain/function: PF04359 DUF493 [H]
EC number: NA
Molecular weight: Translated: 10944; Mature: 10813
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESNNHNQQETFFEFPCQFPIKIMANPQKETVEFILSVFEKYVPNHSEIDFNTKESKTG CCCCCCCCCCHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KYISITAIFTADSKEQLDNIYKEISAHPEVHMVL CEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure SESNNHNQQETFFEFPCQFPIKIMANPQKETVEFILSVFEKYVPNHSEIDFNTKESKTG CCCCCCCCCHHHEECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KYISITAIFTADSKEQLDNIYKEISAHPEVHMVL CEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]