| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256378
Identifier: 89256378
GI number: 89256378
Start: 997117
End: 997548
Strand: Direct
Name: 89256378
Synonym: FTL_1040
Alternate gene names: NA
Gene position: 997117-997548 (Clockwise)
Preceding gene: 89256377
Following gene: 89256379
Centisome position: 52.59
GC content: 30.79
Gene sequence:
>432_bases ATGAAAAGTATCAATAAACTTATCTTACTTATAGGAGCGTTGGCTTTTTCAGTATCAGCTTTTGCAGTAGAGCAAACCTC ATATAATGCATATACTATTGGTCAGGCATTAGGTAAAGTTTCTCATAAAAGTTTTGCTGCTATGGACCAAGAATTAGTCA AAAAAGATTTCATCTTAGGTTTTGATGATACCCTTTTGGAACATAAGCCTGATATTAGAAAAATTTCAGATAAAGACTCA TATGAAGTGGGGATGATTATCGCTGCACAGTATAAAGTAAGATTAAAGAAAATGATTGCAGTAAATGAAGCTAACTGTCA AGAATTTGTTAAAGGTTTTAATGAAGGGGTTGATACAAAAGATACAAAACTTACTATTCAAGATAAAGAGATATTAAAGC ATTTTAAAATATCTCGTGAGGAAGATAATTAG
Upstream 100 bases:
>100_bases GCTTTATAAAAGTAATATAACAAAAGCATATAAACTAGCTGTAAACTTCTTAGCTCTTTGTGTTAGAATTGTTGCTATTA ACTTTGAATTATTATAGACA
Downstream 100 bases:
>100_bases TTAGATTATTTAGTAATATGTATTGATAAATGTATTCTGCTACTTTATTCTTAATCCTAATTAAGTAAATACTATCAATA AAATAAATAATGCAACAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKSINKLILLIGALAFSVSAFAVEQTSYNAYTIGQALGKVSHKSFAAMDQELVKKDFILGFDDTLLEHKPDIRKISDKDS YEVGMIIAAQYKVRLKKMIAVNEANCQEFVKGFNEGVDTKDTKLTIQDKEILKHFKISREEDN
Sequences:
>Translated_143_residues MKSINKLILLIGALAFSVSAFAVEQTSYNAYTIGQALGKVSHKSFAAMDQELVKKDFILGFDDTLLEHKPDIRKISDKDS YEVGMIIAAQYKVRLKKMIAVNEANCQEFVKGFNEGVDTKDTKLTIQDKEILKHFKISREEDN >Mature_143_residues MKSINKLILLIGALAFSVSAFAVEQTSYNAYTIGQALGKVSHKSFAAMDQELVKKDFILGFDDTLLEHKPDIRKISDKDS YEVGMIIAAQYKVRLKKMIAVNEANCQEFVKGFNEGVDTKDTKLTIQDKEILKHFKISREEDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16135; Mature: 16135
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSINKLILLIGALAFSVSAFAVEQTSYNAYTIGQALGKVSHKSFAAMDQELVKKDFILG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FDDTLLEHKPDIRKISDKDSYEVGMIIAAQYKVRLKKMIAVNEANCQEFVKGFNEGVDTK CCHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DTKLTIQDKEILKHFKISREEDN CCEEEECHHHHHHHHCCCCCCCC >Mature Secondary Structure MKSINKLILLIGALAFSVSAFAVEQTSYNAYTIGQALGKVSHKSFAAMDQELVKKDFILG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FDDTLLEHKPDIRKISDKDSYEVGMIIAAQYKVRLKKMIAVNEANCQEFVKGFNEGVDTK CCHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DTKLTIQDKEILKHFKISREEDN CCEEEECHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA