| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256377
Identifier: 89256377
GI number: 89256377
Start: 996413
End: 997036
Strand: Direct
Name: 89256377
Synonym: FTL_1039
Alternate gene names: NA
Gene position: 996413-997036 (Clockwise)
Preceding gene: 89256376
Following gene: 89256378
Centisome position: 52.55
GC content: 24.52
Gene sequence:
>624_bases ATGGAAAATTTTGGTTACATAACACTAAATATATCTTTAATAATTTATTTTATAATTTTTTTACCACAAACAATTCATAA TCAGTTCAAGCATAAAACATTTGAAATTAGTTTGTGGACGCATTCTTTGATGATTATAGCGAACTCTTTAGATTTAATTT ATGCTATTGGCTTTAATATGCAGTGGCAGTATATTTTAGTTGATATAATCTTATTGAGTTTTTTAACTATTCAGCAGCTT CAGATTTTAAATGATCGCAGAGAAAAATATCTATTTATACATACAATTTCTATATTTTTATATTTGTTTTTAGTAATTGT TATGATTTATTTTACTAGCTTAAGTAATCAAATTTTGCTTTGGTTTGGCTCAATAAGTGGGGTTATTTATAATCTCTATT GGTTACCACAAATTTATAAAAATTACCGTCAAAAACAAGCAGAAGGCTTTAGTATTTTTTATCTAGTACTTTCACTTATC AGTATTATTTGTGATATTAATAGTGCTATATTTTTAGGTTGGCCATTGGTATCTGTAATTGTCTCTAGCTGTTTATCTAT TTTGGTATTGACACAAATAATTCAATATTTCTATTACAAAAGTAGCTTTATAAAAGTAATATAA
Upstream 100 bases:
>100_bases GATCTAAGTAATATTAGCGTAGGGAGTTTGTTTGGTTATCTTTTTCTGAAGAATATCACACAAACTCTTATTATTTGATT AAAATAATAGGAGATTAATA
Downstream 100 bases:
>100_bases CAAAAGCATATAAACTAGCTGTAAACTTCTTAGCTCTTTGTGTTAGAATTGTTGCTATTAACTTTGAATTATTATAGACA ATGAAAAGTATCAATAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MENFGYITLNISLIIYFIIFLPQTIHNQFKHKTFEISLWTHSLMIIANSLDLIYAIGFNMQWQYILVDIILLSFLTIQQL QILNDRREKYLFIHTISIFLYLFLVIVMIYFTSLSNQILLWFGSISGVIYNLYWLPQIYKNYRQKQAEGFSIFYLVLSLI SIICDINSAIFLGWPLVSVIVSSCLSILVLTQIIQYFYYKSSFIKVI
Sequences:
>Translated_207_residues MENFGYITLNISLIIYFIIFLPQTIHNQFKHKTFEISLWTHSLMIIANSLDLIYAIGFNMQWQYILVDIILLSFLTIQQL QILNDRREKYLFIHTISIFLYLFLVIVMIYFTSLSNQILLWFGSISGVIYNLYWLPQIYKNYRQKQAEGFSIFYLVLSLI SIICDINSAIFLGWPLVSVIVSSCLSILVLTQIIQYFYYKSSFIKVI >Mature_207_residues MENFGYITLNISLIIYFIIFLPQTIHNQFKHKTFEISLWTHSLMIIANSLDLIYAIGFNMQWQYILVDIILLSFLTIQQL QILNDRREKYLFIHTISIFLYLFLVIVMIYFTSLSNQILLWFGSISGVIYNLYWLPQIYKNYRQKQAEGFSIFYLVLSLI SIICDINSAIFLGWPLVSVIVSSCLSILVLTQIIQYFYYKSSFIKVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24483; Mature: 24483
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFGYITLNISLIIYFIIFLPQTIHNQFKHKTFEISLWTHSLMIIANSLDLIYAIGFNM CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHEEEEECCCC QWQYILVDIILLSFLTIQQLQILNDRREKYLFIHTISIFLYLFLVIVMIYFTSLSNQILL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEE WFGSISGVIYNLYWLPQIYKNYRQKQAEGFSIFYLVLSLISIICDINSAIFLGWPLVSVI EEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VSSCLSILVLTQIIQYFYYKSSFIKVI HHHHHHHHHHHHHHHHHHHHHHHHEEC >Mature Secondary Structure MENFGYITLNISLIIYFIIFLPQTIHNQFKHKTFEISLWTHSLMIIANSLDLIYAIGFNM CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHEEEEECCCC QWQYILVDIILLSFLTIQQLQILNDRREKYLFIHTISIFLYLFLVIVMIYFTSLSNQILL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEE WFGSISGVIYNLYWLPQIYKNYRQKQAEGFSIFYLVLSLISIICDINSAIFLGWPLVSVI EEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VSSCLSILVLTQIIQYFYYKSSFIKVI HHHHHHHHHHHHHHHHHHHHHHHHEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA