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The map label for this gene is ydiJ [C]

Identifier: 89256320

GI number: 89256320

Start: 939821

End: 941200

Strand: Direct

Name: ydiJ [C]

Synonym: FTL_0971

Alternate gene names: 89256320

Gene position: 939821-941200 (Clockwise)

Preceding gene: 89256319

Following gene: 89256321

Centisome position: 49.57

GC content: 32.75

Gene sequence:

>1380_bases
TTGCCAAAAGCAGTTTTACATATAAATACAGAAGAGGAGGTTTTAAAAGTTATAGAATTAGCAAACACTTATAAAGTTCC
TTTAACATTTCGAGCAGCAGGTACTAGTTTAAACGGTCAAGGAATTACAGATCATGTTTTAGTGGTTATCACAAATAAAT
GGAATAACTATAGTATTGAAAATGACGGAAAAATTATTCGTTTACAACCAAGTCTAACAGGTGGGCAGGCTAATTTATTT
CTCAACAAATATGGCAGAAAAATAGGTCCTGATCCATCTTCTGTAAATGTTGCTAAGATAGGTGGAATAGTAGCTAATAA
TGCTAGTGGTATGTGCTGTGGATTTAAGCATAATAGTTATAATACTCTACAAGATATTAGAGTTATCTTTAGTGATGGAC
AAGTCCTTGATACGAAATCAGTTGATTCAAGAGAAAAGTTTAGAAAAAATAATCCTCACATCATCTCTAAGATTTCGTCA
ATATCTCAACAAGTTAAGTCTAATCAAAAACTAGTAGACTTTATAAAACAGAAATATCAGATAAAAAATACTATGGGGTA
TGCCATTAATGCTCTTATAGATTTTGATGATGAGATAGATATAATTTCACACTTAATGGTTGGTTCTGAAGGGACATTGG
GTTTTATTTCTGAATTTAGCTACAGAACTATTCCAAACTATATAGATAAGTCTACGGCTTTTATCTTTTTTAAGGATATT
ACAACCTGTGCAGAGGCTATTACAGCAATATCTAAATATGATGTTGCTGCAGCTGAGATAATGAGTTATTCAACTCTGAT
GACTATAAAAGACTTAGAAATACTCGATAAAGAGTATAAAGAGCAAATAAGAAAATTAGAGGAAGGTTCTGCAGTATTAA
TGTTTGAGCTAGATGCTGATAGCTCTGAATCACTAGAAGTTAAGAAAGCTAAAATTCTTGAAGTCTTAAAGGATTTTGAG
CCTCTTTTTGGCGTCAATTATGTTACAGAAACTAGCAAATATAATCGTCTATGGGATGTGCGTAGAGCTGTATTGCCTTG
TGCGGGTAATAAAAAACCTGCTCTTGATACTTTGGTAATGGAAGATGTTGCATTTCCTGTGGAGAGTCTAGCTGATGGTA
TTACTGATCTTGAAAATTTATTAGAAAAATATCGTTATGATAAAGATATCGCTGGTCATGCTCTAACAGGGAATTTACAT
TTTAATTTATCAACAAACCTTGAGAAAGATGAGGAAGTTCAGCGTTATAAAGAGTTTATGCAAGAATTCACGGATATGGT
TGTAAAAAAATATAATGGATCTTTAAAAGCTGAGCATGGTACCGGTAGAAATATGGCACCATTTGTTGCCAAAGAGTGGG
TGATGAGCTTTACAAAGTAA

Upstream 100 bases:

>100_bases
ATTTATATTAGAATTAGAAAATACTTTAGATAAAAAACAAATAATAATTGATGAGTTTTTATGTTTTGCTTATAGTACAG
ATGCTAGTTTATATAGACTA

Downstream 100 bases:

>100_bases
TGCAAGAAATAAAATTATTATTAGATCCGCATAACTTACTTAATCCAGGTGTTATATTAAATGATGATAAAGATGTTTTT
GTTAAAAACTTCAAAAGAAG

Product: FAD linked oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MPKAVLHINTEEEVLKVIELANTYKVPLTFRAAGTSLNGQGITDHVLVVITNKWNNYSIENDGKIIRLQPSLTGGQANLF
LNKYGRKIGPDPSSVNVAKIGGIVANNASGMCCGFKHNSYNTLQDIRVIFSDGQVLDTKSVDSREKFRKNNPHIISKISS
ISQQVKSNQKLVDFIKQKYQIKNTMGYAINALIDFDDEIDIISHLMVGSEGTLGFISEFSYRTIPNYIDKSTAFIFFKDI
TTCAEAITAISKYDVAAAEIMSYSTLMTIKDLEILDKEYKEQIRKLEEGSAVLMFELDADSSESLEVKKAKILEVLKDFE
PLFGVNYVTETSKYNRLWDVRRAVLPCAGNKKPALDTLVMEDVAFPVESLADGITDLENLLEKYRYDKDIAGHALTGNLH
FNLSTNLEKDEEVQRYKEFMQEFTDMVVKKYNGSLKAEHGTGRNMAPFVAKEWVMSFTK

Sequences:

>Translated_459_residues
MPKAVLHINTEEEVLKVIELANTYKVPLTFRAAGTSLNGQGITDHVLVVITNKWNNYSIENDGKIIRLQPSLTGGQANLF
LNKYGRKIGPDPSSVNVAKIGGIVANNASGMCCGFKHNSYNTLQDIRVIFSDGQVLDTKSVDSREKFRKNNPHIISKISS
ISQQVKSNQKLVDFIKQKYQIKNTMGYAINALIDFDDEIDIISHLMVGSEGTLGFISEFSYRTIPNYIDKSTAFIFFKDI
TTCAEAITAISKYDVAAAEIMSYSTLMTIKDLEILDKEYKEQIRKLEEGSAVLMFELDADSSESLEVKKAKILEVLKDFE
PLFGVNYVTETSKYNRLWDVRRAVLPCAGNKKPALDTLVMEDVAFPVESLADGITDLENLLEKYRYDKDIAGHALTGNLH
FNLSTNLEKDEEVQRYKEFMQEFTDMVVKKYNGSLKAEHGTGRNMAPFVAKEWVMSFTK
>Mature_458_residues
PKAVLHINTEEEVLKVIELANTYKVPLTFRAAGTSLNGQGITDHVLVVITNKWNNYSIENDGKIIRLQPSLTGGQANLFL
NKYGRKIGPDPSSVNVAKIGGIVANNASGMCCGFKHNSYNTLQDIRVIFSDGQVLDTKSVDSREKFRKNNPHIISKISSI
SQQVKSNQKLVDFIKQKYQIKNTMGYAINALIDFDDEIDIISHLMVGSEGTLGFISEFSYRTIPNYIDKSTAFIFFKDIT
TCAEAITAISKYDVAAAEIMSYSTLMTIKDLEILDKEYKEQIRKLEEGSAVLMFELDADSSESLEVKKAKILEVLKDFEP
LFGVNYVTETSKYNRLWDVRRAVLPCAGNKKPALDTLVMEDVAFPVESLADGITDLENLLEKYRYDKDIAGHALTGNLHF
NLSTNLEKDEEVQRYKEFMQEFTDMVVKKYNGSLKAEHGTGRNMAPFVAKEWVMSFTK

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To mammalian alkyldihydroxyacetonephosphate synthases, to yeast AIP2 and DLD1 and to E.coli ygcU [H]

Homologues:

Organism=Escherichia coli, GI1787977, Length=479, Percent_Identity=22.964509394572, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR006094 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51611; Mature: 51479

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAVLHINTEEEVLKVIELANTYKVPLTFRAAGTSLNGQGITDHVLVVITNKWNNYSIE
CCCEEEEECCHHHHHHHHHHHCCEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC
NDGKIIRLQPSLTGGQANLFLNKYGRKIGPDPSSVNVAKIGGIVANNASGMCCGFKHNSY
CCCEEEEEECCCCCCCCEEHHHHCCCCCCCCCCCCCHHHHCCEEECCCCCEEEECCCCCC
NTLQDIRVIFSDGQVLDTKSVDSREKFRKNNPHIISKISSISQQVKSNQKLVDFIKQKYQ
CHHHHHHHEECCCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IKNTMGYAINALIDFDDEIDIISHLMVGSEGTLGFISEFSYRTIPNYIDKSTAFIFFKDI
HHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCCHHHCCHHHCCCEEEEEEHHH
TTCAEAITAISKYDVAAAEIMSYSTLMTIKDLEILDKEYKEQIRKLEEGSAVLMFELDAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
SSESLEVKKAKILEVLKDFEPLFGVNYVTETSKYNRLWDVRRAVLPCAGNKKPALDTLVM
CCCCCHHHHHHHHHHHHHCCHHHCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
EDVAFPVESLADGITDLENLLEKYRYDKDIAGHALTGNLHFNLSTNLEKDEEVQRYKEFM
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHH
QEFTDMVVKKYNGSLKAEHGTGRNMAPFVAKEWVMSFTK
HHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PKAVLHINTEEEVLKVIELANTYKVPLTFRAAGTSLNGQGITDHVLVVITNKWNNYSIE
CCEEEEECCHHHHHHHHHHHCCEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC
NDGKIIRLQPSLTGGQANLFLNKYGRKIGPDPSSVNVAKIGGIVANNASGMCCGFKHNSY
CCCEEEEEECCCCCCCCEEHHHHCCCCCCCCCCCCCHHHHCCEEECCCCCEEEECCCCCC
NTLQDIRVIFSDGQVLDTKSVDSREKFRKNNPHIISKISSISQQVKSNQKLVDFIKQKYQ
CHHHHHHHEECCCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IKNTMGYAINALIDFDDEIDIISHLMVGSEGTLGFISEFSYRTIPNYIDKSTAFIFFKDI
HHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCCHHHCCHHHCCCEEEEEEHHH
TTCAEAITAISKYDVAAAEIMSYSTLMTIKDLEILDKEYKEQIRKLEEGSAVLMFELDAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
SSESLEVKKAKILEVLKDFEPLFGVNYVTETSKYNRLWDVRRAVLPCAGNKKPALDTLVM
CCCCCHHHHHHHHHHHHHCCHHHCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
EDVAFPVESLADGITDLENLLEKYRYDKDIAGHALTGNLHFNLSTNLEKDEEVQRYKEFM
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHH
QEFTDMVVKKYNGSLKAEHGTGRNMAPFVAKEWVMSFTK
HHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]