| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256288
Identifier: 89256288
GI number: 89256288
Start: 907855
End: 908667
Strand: Direct
Name: 89256288
Synonym: FTL_0937
Alternate gene names: NA
Gene position: 907855-908667 (Clockwise)
Preceding gene: 89256285
Following gene: 89256292
Centisome position: 47.88
GC content: 28.54
Gene sequence:
>813_bases ATGAACATAGTAGATTCACATATTCATTTCTGGGATATAACCAATGGTTATAATGATTGGGTTAAAGATACCAATTTGCC AAAACTGGTAACACCAGAGAATTTAGAGGCGAGTGCTTTTGTGCATATAGAAGCTCACAGTGAGAAATTTGATCCTTTAT GTGAATATAATTGGCTAAAATCTAAATTTAACAATAGTAATATTAAAGTAGTAGCTTTTGTTGATTTTACATTAGAAATT TCTCAGTTTGAAAAAAAGATCATATACTTATCTGAACATAATAATATCGTTGGCATACGCCAAATTATGTCAAAAACGTA TAAATCAAAATATAGTCCATTTGAAAAATGTATACCTAAAGATTTAGAGCAAAAGTTAAAAATTCTAAGAGAACATAAAC TTATTTTTGAAGCGCAAATGTATCCAGAGCAGTTTTTACCTCTTTTAGAAAAAATTAATAACTCTGGAGTGAAAATGGTG GTGGAACATTTTGGTCTACCTTTATTTGGGCGTAATAATAATCTAGCAGAGTGGCAAAGATTCATAAAAGAATGTAGTCA AAATACTAATTGGAATCTTAAGCTTTCTGGTTTTGATTTAAATAATCAAATGTCAAATGTAAAGAAAGCACTAGACTTTG TTTTTGAGAATATTTCATTTCATCAATTATGTTATGGTTCGAACTTTCCTGTTTCAAATCATGATGATTATAATTTTTGG CAGAAATTTTTGTATAAATACATTGATAATGATGAAATATCTAAACATGTGTTTAAAAATGTAGCTCGGAGGATTTACTT CAAAGAGGGCTAA
Upstream 100 bases:
>100_bases ATAAAAGGCATTTGTAAAGTTTTTATAGTAAAAATCTTTTAAAAATCTTTATTAAGTTAGATAATCTATTACACGTAGAT ACAAAAAATATTATTATGCT
Downstream 100 bases:
>100_bases TATCTTCAGCAAATTTTTTAGCATTAGAAAAATCTATTTTATCTGGATTTTTTATATCAAAAATTAATTCCATAAGCATT TGTTTGTTTAGCTTAGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNIVDSHIHFWDITNGYNDWVKDTNLPKLVTPENLEASAFVHIEAHSEKFDPLCEYNWLKSKFNNSNIKVVAFVDFTLEI SQFEKKIIYLSEHNNIVGIRQIMSKTYKSKYSPFEKCIPKDLEQKLKILREHKLIFEAQMYPEQFLPLLEKINNSGVKMV VEHFGLPLFGRNNNLAEWQRFIKECSQNTNWNLKLSGFDLNNQMSNVKKALDFVFENISFHQLCYGSNFPVSNHDDYNFW QKFLYKYIDNDEISKHVFKNVARRIYFKEG
Sequences:
>Translated_270_residues MNIVDSHIHFWDITNGYNDWVKDTNLPKLVTPENLEASAFVHIEAHSEKFDPLCEYNWLKSKFNNSNIKVVAFVDFTLEI SQFEKKIIYLSEHNNIVGIRQIMSKTYKSKYSPFEKCIPKDLEQKLKILREHKLIFEAQMYPEQFLPLLEKINNSGVKMV VEHFGLPLFGRNNNLAEWQRFIKECSQNTNWNLKLSGFDLNNQMSNVKKALDFVFENISFHQLCYGSNFPVSNHDDYNFW QKFLYKYIDNDEISKHVFKNVARRIYFKEG >Mature_270_residues MNIVDSHIHFWDITNGYNDWVKDTNLPKLVTPENLEASAFVHIEAHSEKFDPLCEYNWLKSKFNNSNIKVVAFVDFTLEI SQFEKKIIYLSEHNNIVGIRQIMSKTYKSKYSPFEKCIPKDLEQKLKILREHKLIFEAQMYPEQFLPLLEKINNSGVKMV VEHFGLPLFGRNNNLAEWQRFIKECSQNTNWNLKLSGFDLNNQMSNVKKALDFVFENISFHQLCYGSNFPVSNHDDYNFW QKFLYKYIDNDEISKHVFKNVARRIYFKEG
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32086; Mature: 32086
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVDSHIHFWDITNGYNDWVKDTNLPKLVTPENLEASAFVHIEAHSEKFDPLCEYNWLK CCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHH SKFNNSNIKVVAFVDFTLEISQFEKKIIYLSEHNNIVGIRQIMSKTYKSKYSPFEKCIPK HHCCCCCEEEEEEEEEEEEHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCHH DLEQKLKILREHKLIFEAQMYPEQFLPLLEKINNSGVKMVVEHFGLPLFGRNNNLAEWQR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCEEECCCCCHHHHHH FIKECSQNTNWNLKLSGFDLNNQMSNVKKALDFVFENISFHQLCYGSNFPVSNHDDYNFW HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHH QKFLYKYIDNDEISKHVFKNVARRIYFKEG HHHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIVDSHIHFWDITNGYNDWVKDTNLPKLVTPENLEASAFVHIEAHSEKFDPLCEYNWLK CCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHH SKFNNSNIKVVAFVDFTLEISQFEKKIIYLSEHNNIVGIRQIMSKTYKSKYSPFEKCIPK HHCCCCCEEEEEEEEEEEEHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCHH DLEQKLKILREHKLIFEAQMYPEQFLPLLEKINNSGVKMVVEHFGLPLFGRNNNLAEWQR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCEEECCCCCHHHHHH FIKECSQNTNWNLKLSGFDLNNQMSNVKKALDFVFENISFHQLCYGSNFPVSNHDDYNFW HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHH QKFLYKYIDNDEISKHVFKNVARRIYFKEG HHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA