| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256292
Identifier: 89256292
GI number: 89256292
Start: 911303
End: 911806
Strand: Direct
Name: 89256292
Synonym: FTL_0941
Alternate gene names: NA
Gene position: 911303-911806 (Clockwise)
Preceding gene: 89256288
Following gene: 89256293
Centisome position: 48.06
GC content: 30.95
Gene sequence:
>504_bases ATGTCTAAATTATTAGTTGTTATCAACATGCAAAAAGGTTTTGATTGCTCTGAGGCTAGAGCTGTAATACCAAATCTTAA TAAATTTTATACCTATTTTGATAATGTTAGTTTTGTGATGTTTGAAAATAGGAAGAATTCACTTTTTGAAACTCAATTAA AATGGATTGATTTTCAAAATGAAGAAGATAGAAAGCTTATTGAAGGTGTAGAGATACCACAAAATGCGCATTTTACTCAT CACCATAACTATACGGTATACAATGATGAGCTTAAAGCTTTAATAAAAAAACTTAAACCAGCAAAAGTCTATCTTTCTGG TCTATTCTCAGATGTTTGTTTATTAAAAACAGCTATGGATATGTTTGATGATGGGATTGTCCCTTATATTATCAAAGATC TAAGTGGGTCACCACATGGTGATATTGCACATGAAGTAGCATTTGCAGCTATGAAAGAAGGTTTAGGAGCTGATCGTATA ATATCTACCAAAGAGATAAGCTAA
Upstream 100 bases:
>100_bases CATAAAATTTTAGCAAAATGCAGAGATATTGTATTGATTAAGCTGCAATCATTAGATAGTATCTACAAAGTTATAGCTAA ATAATCGTGAGTAAATACAG
Downstream 100 bases:
>100_bases TGGATAGTATATATCAATCAATAGTATCATCATTTTATGACTATCAGTCGTATTTTGAATTAGTTGCTGCTGCAACTGGG GTAGCTGGAGTATATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Isochorismatase Hydrolase; Isochorismatase Hydrolase Family Protein
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSKLLVVINMQKGFDCSEARAVIPNLNKFYTYFDNVSFVMFENRKNSLFETQLKWIDFQNEEDRKLIEGVEIPQNAHFTH HHNYTVYNDELKALIKKLKPAKVYLSGLFSDVCLLKTAMDMFDDGIVPYIIKDLSGSPHGDIAHEVAFAAMKEGLGADRI ISTKEIS
Sequences:
>Translated_167_residues MSKLLVVINMQKGFDCSEARAVIPNLNKFYTYFDNVSFVMFENRKNSLFETQLKWIDFQNEEDRKLIEGVEIPQNAHFTH HHNYTVYNDELKALIKKLKPAKVYLSGLFSDVCLLKTAMDMFDDGIVPYIIKDLSGSPHGDIAHEVAFAAMKEGLGADRI ISTKEIS >Mature_166_residues SKLLVVINMQKGFDCSEARAVIPNLNKFYTYFDNVSFVMFENRKNSLFETQLKWIDFQNEEDRKLIEGVEIPQNAHFTHH HNYTVYNDELKALIKKLKPAKVYLSGLFSDVCLLKTAMDMFDDGIVPYIIKDLSGSPHGDIAHEVAFAAMKEGLGADRII STKEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19081; Mature: 18950
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLVVINMQKGFDCSEARAVIPNLNKFYTYFDNVSFVMFENRKNSLFETQLKWIDFQN CCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHEECCCC EEDRKLIEGVEIPQNAHFTHHHNYTVYNDELKALIKKLKPAKVYLSGLFSDVCLLKTAMD CCHHHHHHCCCCCCCCCEEECCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MFDDGIVPYIIKDLSGSPHGDIAHEVAFAAMKEGLGADRIISTKEIS HHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SKLLVVINMQKGFDCSEARAVIPNLNKFYTYFDNVSFVMFENRKNSLFETQLKWIDFQN CCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHEECCCC EEDRKLIEGVEIPQNAHFTHHHNYTVYNDELKALIKKLKPAKVYLSGLFSDVCLLKTAMD CCHHHHHHCCCCCCCCCEEECCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MFDDGIVPYIIKDLSGSPHGDIAHEVAFAAMKEGLGADRIISTKEIS HHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA