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The map label for this gene is rmuC [H]

Identifier: 89256284

GI number: 89256284

Start: 904838

End: 906253

Strand: Direct

Name: rmuC [H]

Synonym: FTL_0933

Alternate gene names: 89256284

Gene position: 904838-906253 (Clockwise)

Preceding gene: 89256283

Following gene: 89256285

Centisome position: 47.72

GC content: 30.16

Gene sequence:

>1416_bases
ATGATACTAGCTATAGCATTAATAATGCTATTAATTATTTTTGGCATAATATTTTTTTTAATAATTAACAAAAAAACCGC
ACAAGTTGATAATATCCGTCAAACATTTGAGCAATACAAAAACTCCACACAAGAAGAATTAGTATCACTACTAAGTAAAG
AAATTACATTTGATACATTATTAAATCAAGAAAAACAAAAGAATACAGAATTAAAGCATGATAGTTTACAACGTATAGAT
GAATTAAAGCTGGAGTTAAAATTAGAGAGAGATAAAGCCTATAACTATATTGAAGAGATAAAAAATTATAAATCACAAAT
AGCAACTCTAGAAACCCAACTTAGAGAGCAGAATAATTCTCTAAGAGATAAAATAGAGTTATTACAAAATAGTGAAACGA
AGCTGAAATCTGAATTTGAAAATTTAGCTAATAAAATTTTTGAAGATAGTTCAAAAAAACTCACTGAACGAAATCAAGAA
AGTTTAAATAGTGTTTTAAATCCAGTCAAAGAGCAGTTAAGAGATTTTAAGCAAAAAGTTGAAGATGTTTATGATAAAGA
GTCTAACGCTAGAAGCGCGTTGCAAAACGAACTCAAAACTCTTAAAGAACTCAATCAAAAAATGACTACAGAGGCGCATA
ACCTCACAAATGCTTTGAGAAACAGTACTAAACAGCAAGGTATATGGGGTGAAATGATACTTGAAAATGTTCTTGAAAAA
TCTGGTCTTAGAAAAGGTTTTGAGTATTTCAGAGAGAAGCATGCTACAGATGAGGAGGGTAAAGTATATCGTCCTGATGT
GGTCGTTAAGCTACCTGATAATCGTGATATTATCATAGATGCTAAAACTTCACTATTTGCTTATAATGACTATATGGCTG
ATGCTGATGATCACAAGCATTCTCACCTAAAAGCTCATATTAAATCAATCAGAGAACATATCAAAGGGCTAGCTAATAAA
AATTATGAAAATCTAAAAGGAATAAACTCCTTAGATTTTATCTTTATGTTTATACCCATAGAAGGGGCATTATTACTTGC
TCTTGATAATGACGCAAGCTTATATGATGAGGCATTTAAACAAAAGATAATCTTAGTTAGTCCGACAACGTTATTAGTAG
CATTACGAGCAGTTGAGAATACTTGGAGATATGAAAAACAAGCTCAAAGTATCACAGATATATATACTAGAGCAGAAGAG
TTATATAAAAAATTTGTTGGTTTCGTTGAAGACTTAGAAAAAGTAGGCAAGTCTATAAATGATGCTAATAAGTCTTATGA
AAACGCTTTTAGTAAATTAAAAACTGGTCGAGGAAACTTAATTGGTCAAGTTGAAAAACTAAAACAAGTCTCAAATATCA
GAACTAAAAAAGAGCTTGATAGTAATTTGGTTGAGAATGCAGTAAGCGATAGCTAA

Upstream 100 bases:

>100_bases
GCTATGGGTGATGCAACTACAGCAGCAGAGGTAATTCGTAAAGCTCTGCAAGGATCAATAAAATCAAAAGGATAATAATT
ATAATATAAGGGGAAGACAA

Downstream 100 bases:

>100_bases
ATTATATTTATATTATCTGAGTTATTAAATTTAAAAGAAGAACATAAGATGCGATTTTTTATATTTTTTCTTAGAGTCAT
TCTGGAAATATTTAGGTAAG

Product: DNA recombination protein RmuC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MILAIALIMLLIIFGIIFFLIINKKTAQVDNIRQTFEQYKNSTQEELVSLLSKEITFDTLLNQEKQKNTELKHDSLQRID
ELKLELKLERDKAYNYIEEIKNYKSQIATLETQLREQNNSLRDKIELLQNSETKLKSEFENLANKIFEDSSKKLTERNQE
SLNSVLNPVKEQLRDFKQKVEDVYDKESNARSALQNELKTLKELNQKMTTEAHNLTNALRNSTKQQGIWGEMILENVLEK
SGLRKGFEYFREKHATDEEGKVYRPDVVVKLPDNRDIIIDAKTSLFAYNDYMADADDHKHSHLKAHIKSIREHIKGLANK
NYENLKGINSLDFIFMFIPIEGALLLALDNDASLYDEAFKQKIILVSPTTLLVALRAVENTWRYEKQAQSITDIYTRAEE
LYKKFVGFVEDLEKVGKSINDANKSYENAFSKLKTGRGNLIGQVEKLKQVSNIRTKKELDSNLVENAVSDS

Sequences:

>Translated_471_residues
MILAIALIMLLIIFGIIFFLIINKKTAQVDNIRQTFEQYKNSTQEELVSLLSKEITFDTLLNQEKQKNTELKHDSLQRID
ELKLELKLERDKAYNYIEEIKNYKSQIATLETQLREQNNSLRDKIELLQNSETKLKSEFENLANKIFEDSSKKLTERNQE
SLNSVLNPVKEQLRDFKQKVEDVYDKESNARSALQNELKTLKELNQKMTTEAHNLTNALRNSTKQQGIWGEMILENVLEK
SGLRKGFEYFREKHATDEEGKVYRPDVVVKLPDNRDIIIDAKTSLFAYNDYMADADDHKHSHLKAHIKSIREHIKGLANK
NYENLKGINSLDFIFMFIPIEGALLLALDNDASLYDEAFKQKIILVSPTTLLVALRAVENTWRYEKQAQSITDIYTRAEE
LYKKFVGFVEDLEKVGKSINDANKSYENAFSKLKTGRGNLIGQVEKLKQVSNIRTKKELDSNLVENAVSDS
>Mature_471_residues
MILAIALIMLLIIFGIIFFLIINKKTAQVDNIRQTFEQYKNSTQEELVSLLSKEITFDTLLNQEKQKNTELKHDSLQRID
ELKLELKLERDKAYNYIEEIKNYKSQIATLETQLREQNNSLRDKIELLQNSETKLKSEFENLANKIFEDSSKKLTERNQE
SLNSVLNPVKEQLRDFKQKVEDVYDKESNARSALQNELKTLKELNQKMTTEAHNLTNALRNSTKQQGIWGEMILENVLEK
SGLRKGFEYFREKHATDEEGKVYRPDVVVKLPDNRDIIIDAKTSLFAYNDYMADADDHKHSHLKAHIKSIREHIKGLANK
NYENLKGINSLDFIFMFIPIEGALLLALDNDASLYDEAFKQKIILVSPTTLLVALRAVENTWRYEKQAQSITDIYTRAEE
LYKKFVGFVEDLEKVGKSINDANKSYENAFSKLKTGRGNLIGQVEKLKQVSNIRTKKELDSNLVENAVSDS

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=379, Percent_Identity=43.5356200527704, Blast_Score=333, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 54497; Mature: 54497

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILAIALIMLLIIFGIIFFLIINKKTAQVDNIRQTFEQYKNSTQEELVSLLSKEITFDTL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LNQEKQKNTELKHDSLQRIDELKLELKLERDKAYNYIEEIKNYKSQIATLETQLREQNNS
HCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRDKIELLQNSETKLKSEFENLANKIFEDSSKKLTERNQESLNSVLNPVKEQLRDFKQKV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDVYDKESNARSALQNELKTLKELNQKMTTEAHNLTNALRNSTKQQGIWGEMILENVLEK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
SGLRKGFEYFREKHATDEEGKVYRPDVVVKLPDNRDIIIDAKTSLFAYNDYMADADDHKH
HHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCEEEEECCHHHEEECCHHCCCCCCHH
SHLKAHIKSIREHIKGLANKNYENLKGINSLDFIFMFIPIEGALLLALDNDASLYDEAFK
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHEEEECCCEEEEEECCCHHHHHHHHH
QKIILVSPTTLLVALRAVENTWRYEKQAQSITDIYTRAEELYKKFVGFVEDLEKVGKSIN
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DANKSYENAFSKLKTGRGNLIGQVEKLKQVSNIRTKKELDSNLVENAVSDS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILAIALIMLLIIFGIIFFLIINKKTAQVDNIRQTFEQYKNSTQEELVSLLSKEITFDTL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LNQEKQKNTELKHDSLQRIDELKLELKLERDKAYNYIEEIKNYKSQIATLETQLREQNNS
HCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRDKIELLQNSETKLKSEFENLANKIFEDSSKKLTERNQESLNSVLNPVKEQLRDFKQKV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDVYDKESNARSALQNELKTLKELNQKMTTEAHNLTNALRNSTKQQGIWGEMILENVLEK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
SGLRKGFEYFREKHATDEEGKVYRPDVVVKLPDNRDIIIDAKTSLFAYNDYMADADDHKH
HHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCEEEEECCHHHEEECCHHCCCCCCHH
SHLKAHIKSIREHIKGLANKNYENLKGINSLDFIFMFIPIEGALLLALDNDASLYDEAFK
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHEEEECCCEEEEEECCCHHHHHHHHH
QKIILVSPTTLLVALRAVENTWRYEKQAQSITDIYTRAEELYKKFVGFVEDLEKVGKSIN
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DANKSYENAFSKLKTGRGNLIGQVEKLKQVSNIRTKKELDSNLVENAVSDS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]