Click here to switch to the map view.

The map label for this gene is garP [C]

Identifier: 89256282

GI number: 89256282

Start: 902959

End: 904149

Strand: Direct

Name: garP [C]

Synonym: FTL_0931

Alternate gene names: 89256282

Gene position: 902959-904149 (Clockwise)

Preceding gene: 89256281

Following gene: 89256283

Centisome position: 47.62

GC content: 30.65

Gene sequence:

>1191_bases
ATGGGCACAAAGTATTACATTCGAGCTTGTATAGTATGGCTTATCGGCGCTACATTTTTCTTTTATGAGTTTTTTCTGAG
GGTGCTACCGAATTCACTTCATCAAGATATAGTTAATAGTTTTAATGCGACAGCTTTTAGCTTTTCATTATTTGGTGGGG
CTTTTTACCTGTGTTATTTATTATTACAAGTGCCGGTTGGATTTTTGTTTGATAAGTATGGTATAAAAAAATCACTATTT
TTTGCTACTATCACCTGCGCGTTAGGAGCATTACTTTTTTCGTTAACATCTAGCTTATATGTGGCAATTTTTGCAAGATG
TTTAATGGGTATCGGCGCAGCTTTTGGTTTATTAGGGTTATTGATAATATCAACACAATGGTTCCCGATGAAATATATGG
GTATTTTATCTGGATCTACACAAATCTTGGGAACTTTAGGACCTATTTTAGCTGGTGGACCATTGCTATTTTTTGTAAAT
TATTTGGATAGTTGGAGATTAGTCATATTGATATCAGCTATCTTAGGAATTTTTTTAGCGGTATTAATTCTAATTTTTGT
TAAAGAAGGTACAAAAGCTGCAGAAACTTTGAGCAAGCAAGAAGTAAATAGCGAGATAAAAAGTAATCTTTTAAATAAAA
AATTAATTACTATATATTTCTACGCTTTCTTTATTTATTGTTCGATACCTACATTAGGAGCTATTTGGGGAGTTAGCTTA
TTGCAAACTAAAGGACTTACTATTACTCAAGCTTCTTATTCGGTAGCTTTTTTGTGGTTAGATCTTGGTATTGGAAGTCC
TTTTTTTGGTCTAATGTATGATAAGTTTAAAGATAAAATAAATATGTTATTTGTAGTTTCTTTACTAAGATTTATTTGTG
TTTGTACTTTATTATTTTTACATTTAAATCAAATAGTGAGTATGATTTTACTATTCTTGATTGGTAGTGCTGCTGGTCAG
ACACTTTCATTTACTGTGATAGCAAACTATAGGGGACAAAAGCCTAAATCAATATTTTTTGGTATAAATAACACTGTAGT
TATGTTTTCGGGGTTTATTGTTCCAATTATTATTGGAGTTTTAGTTAATAGTTTTAATTTAGATATTTTGTTAGCTCTGT
CAATTCTTCCTATCGCTTTTTTAGCAGCACTTATAGTAAGCTTAAAATTATCAACAGTTCAAAGGGACTAA

Upstream 100 bases:

>100_bases
ACAAAAAAGAATTAAATGAAATATCAAAAAAATCATTTGTCTAAGTTTGATGTCAAACTTATAATAGCCTTATCATAAAA
ATTTACCAGTATTGTTTTAT

Downstream 100 bases:

>100_bases
GGGATATTATTGATGATAAGTTTTATAAAAGGTGTATTGATAGAGAAAGATCCAACAGCTTTGCTTATTGATGTAAATGG
TATTGGTTATGAAGTTTTTG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Permease; Transporter MFS Superfamily; Sugar Phosphate Permease; Facilitator Superfamily Permease; Facilitator Superfamily Protein; Facilitator Family Transporter Transporter; Transporter Facilitator Family; Sugar Transporter; Facilitator Protein; Facilitator Membrane Proteins; Intraphagosomal Amino Acid Transporter Family Protein; Sugar Transport Family Protein; Transport Proteins; Multidrug ABC Transporter; Facilitator Superfamily Sugar Transporter; Facilitator Family Protein; NasA Protein

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MGTKYYIRACIVWLIGATFFFYEFFLRVLPNSLHQDIVNSFNATAFSFSLFGGAFYLCYLLLQVPVGFLFDKYGIKKSLF
FATITCALGALLFSLTSSLYVAIFARCLMGIGAAFGLLGLLIISTQWFPMKYMGILSGSTQILGTLGPILAGGPLLFFVN
YLDSWRLVILISAILGIFLAVLILIFVKEGTKAAETLSKQEVNSEIKSNLLNKKLITIYFYAFFIYCSIPTLGAIWGVSL
LQTKGLTITQASYSVAFLWLDLGIGSPFFGLMYDKFKDKINMLFVVSLLRFICVCTLLFLHLNQIVSMILLFLIGSAAGQ
TLSFTVIANYRGQKPKSIFFGINNTVVMFSGFIVPIIIGVLVNSFNLDILLALSILPIAFLAALIVSLKLSTVQRD

Sequences:

>Translated_396_residues
MGTKYYIRACIVWLIGATFFFYEFFLRVLPNSLHQDIVNSFNATAFSFSLFGGAFYLCYLLLQVPVGFLFDKYGIKKSLF
FATITCALGALLFSLTSSLYVAIFARCLMGIGAAFGLLGLLIISTQWFPMKYMGILSGSTQILGTLGPILAGGPLLFFVN
YLDSWRLVILISAILGIFLAVLILIFVKEGTKAAETLSKQEVNSEIKSNLLNKKLITIYFYAFFIYCSIPTLGAIWGVSL
LQTKGLTITQASYSVAFLWLDLGIGSPFFGLMYDKFKDKINMLFVVSLLRFICVCTLLFLHLNQIVSMILLFLIGSAAGQ
TLSFTVIANYRGQKPKSIFFGINNTVVMFSGFIVPIIIGVLVNSFNLDILLALSILPIAFLAALIVSLKLSTVQRD
>Mature_395_residues
GTKYYIRACIVWLIGATFFFYEFFLRVLPNSLHQDIVNSFNATAFSFSLFGGAFYLCYLLLQVPVGFLFDKYGIKKSLFF
ATITCALGALLFSLTSSLYVAIFARCLMGIGAAFGLLGLLIISTQWFPMKYMGILSGSTQILGTLGPILAGGPLLFFVNY
LDSWRLVILISAILGIFLAVLILIFVKEGTKAAETLSKQEVNSEIKSNLLNKKLITIYFYAFFIYCSIPTLGAIWGVSLL
QTKGLTITQASYSVAFLWLDLGIGSPFFGLMYDKFKDKINMLFVVSLLRFICVCTLLFLHLNQIVSMILLFLIGSAAGQT
LSFTVIANYRGQKPKSIFFGINNTVVMFSGFIVPIIIGVLVNSFNLDILLALSILPIAFLAALIVSLKLSTVQRD

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43782; Mature: 43651

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTKYYIRACIVWLIGATFFFYEFFLRVLPNSLHQDIVNSFNATAFSFSLFGGAFYLCYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH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HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA