The gene/protein map for NC_007880 is currently unavailable.
Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256238

Identifier: 89256238

GI number: 89256238

Start: 858617

End: 859567

Strand: Direct

Name: 89256238

Synonym: FTL_0880

Alternate gene names: NA

Gene position: 858617-859567 (Clockwise)

Preceding gene: 89256236

Following gene: 89256245

Centisome position: 45.29

GC content: 27.23

Gene sequence:

>951_bases
ATGGCTATTGATTTATTAAAACTACAAAATAAGCTAGGGTATGGTGTTGCTGCTAGAGGAATGTGTCACGGAATAGCTTA
TATGGCTATACAAGCTATTATAAGAGATGCTTTAGAAACATATATTAGCAGAATAAGATATTTAGAAGAAACATTATCGC
AACATAACAATAATCAAGATGCTGCGATTAATGAAATTATAGAAAAAATAAATGTAGCATATGAAAAAAGGAAGAATAAA
CAAAATCTAGATTGTGATGAAATAAAATTATTAGATATATTAAATTGGTTTGATGGAGTTCAAATATACCAAAATCACAA
TAAACTATTATCTGGAGGTCAAAGTTATGAGAATGCAACAAACTTTTTCTCAGCTAATACAAATCAAAATGAAAAAGAAA
ATAGAAAAATCTTTGTTATAGCTAAAGAATTAAATATATTAACAAAAGAGTTGATAGATGATATTTTTAATAAGATTGAT
AACAGTAAAGAACCTATTGCTTTTTCATTAAGCGCCCCAGGTCATATTATTTCGATAGGTAAAAGCTCTAATTATAAACC
GATATATTTAGTTAATCATAATATTCATAAACATATATTAAATAAGAAATCGTTATATAGTGAAGTATTTTGTGCATTTA
AGTATTCGATGAGGATAGAAAATATTTCAATTAAATATGTTACTAATAATTTAGATAAAGATGATTTATGTGAATTATTA
TGTATAGCTTTGCAAGATGGCCACGCAGAAGCTATCAAAGTTTATATAGAGGGGATATTTAATCTTTCTGGAATTAATAG
ACGAGAACTGTTAGCTGCTAAAATGCCAGATGGAACACCTGGTTTACATATAGCTTTGCAACAGGGTCATTCAGAAGCTG
TTAAAACTTATAGAGAAATGATATCTAAATTGAAGATCTTAAGTAATGGATTATCAGGATTTTTGCTTTAG

Upstream 100 bases:

>100_bases
ATTATTGGTACTCGACTCTATTTGTCGTATAAAGAGAGATAGGTTTTAAAATTTTTATTATAGAATAATGATATTGTTAT
AAGAACAATAGATAATTTTA

Downstream 100 bases:

>100_bases
GTATGATTGTCAATGCTATTCGAAAAATAACTTTTTTAACAAAAGATTTTAATCTGAGCTTAAAATATTTAGAACTCAAT
TTATGAAAAATCTTGGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MAIDLLKLQNKLGYGVAARGMCHGIAYMAIQAIIRDALETYISRIRYLEETLSQHNNNQDAAINEIIEKINVAYEKRKNK
QNLDCDEIKLLDILNWFDGVQIYQNHNKLLSGGQSYENATNFFSANTNQNEKENRKIFVIAKELNILTKELIDDIFNKID
NSKEPIAFSLSAPGHIISIGKSSNYKPIYLVNHNIHKHILNKKSLYSEVFCAFKYSMRIENISIKYVTNNLDKDDLCELL
CIALQDGHAEAIKVYIEGIFNLSGINRRELLAAKMPDGTPGLHIALQQGHSEAVKTYREMISKLKILSNGLSGFLL

Sequences:

>Translated_316_residues
MAIDLLKLQNKLGYGVAARGMCHGIAYMAIQAIIRDALETYISRIRYLEETLSQHNNNQDAAINEIIEKINVAYEKRKNK
QNLDCDEIKLLDILNWFDGVQIYQNHNKLLSGGQSYENATNFFSANTNQNEKENRKIFVIAKELNILTKELIDDIFNKID
NSKEPIAFSLSAPGHIISIGKSSNYKPIYLVNHNIHKHILNKKSLYSEVFCAFKYSMRIENISIKYVTNNLDKDDLCELL
CIALQDGHAEAIKVYIEGIFNLSGINRRELLAAKMPDGTPGLHIALQQGHSEAVKTYREMISKLKILSNGLSGFLL
>Mature_315_residues
AIDLLKLQNKLGYGVAARGMCHGIAYMAIQAIIRDALETYISRIRYLEETLSQHNNNQDAAINEIIEKINVAYEKRKNKQ
NLDCDEIKLLDILNWFDGVQIYQNHNKLLSGGQSYENATNFFSANTNQNEKENRKIFVIAKELNILTKELIDDIFNKIDN
SKEPIAFSLSAPGHIISIGKSSNYKPIYLVNHNIHKHILNKKSLYSEVFCAFKYSMRIENISIKYVTNNLDKDDLCELLC
IALQDGHAEAIKVYIEGIFNLSGINRRELLAAKMPDGTPGLHIALQQGHSEAVKTYREMISKLKILSNGLSGFLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35850; Mature: 35719

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDLLKLQNKLGYGVAARGMCHGIAYMAIQAIIRDALETYISRIRYLEETLSQHNNNQD
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AAINEIIEKINVAYEKRKNKQNLDCDEIKLLDILNWFDGVQIYQNHNKLLSGGQSYENAT
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHH
NFFSANTNQNEKENRKIFVIAKELNILTKELIDDIFNKIDNSKEPIAFSLSAPGHIISIG
HCEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEC
KSSNYKPIYLVNHNIHKHILNKKSLYSEVFCAFKYSMRIENISIKYVTNNLDKDDLCELL
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHH
CIALQDGHAEAIKVYIEGIFNLSGINRRELLAAKMPDGTPGLHIALQQGHSEAVKTYREM
HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCEEEEEECCCHHHHHHHHHH
ISKLKILSNGLSGFLL
HHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AIDLLKLQNKLGYGVAARGMCHGIAYMAIQAIIRDALETYISRIRYLEETLSQHNNNQD
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AAINEIIEKINVAYEKRKNKQNLDCDEIKLLDILNWFDGVQIYQNHNKLLSGGQSYENAT
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHH
NFFSANTNQNEKENRKIFVIAKELNILTKELIDDIFNKIDNSKEPIAFSLSAPGHIISIG
HCEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEC
KSSNYKPIYLVNHNIHKHILNKKSLYSEVFCAFKYSMRIENISIKYVTNNLDKDDLCELL
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHH
CIALQDGHAEAIKVYIEGIFNLSGINRRELLAAKMPDGTPGLHIALQQGHSEAVKTYREM
HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCEEEEEECCCHHHHHHHHHH
ISKLKILSNGLSGFLL
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA