| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256201
Identifier: 89256201
GI number: 89256201
Start: 823141
End: 823572
Strand: Direct
Name: 89256201
Synonym: FTL_0841
Alternate gene names: NA
Gene position: 823141-823572 (Clockwise)
Preceding gene: 89256200
Following gene: 89256203
Centisome position: 43.41
GC content: 39.81
Gene sequence:
>432_bases TTGGGTGTAGGTTGTCAGGATGATAATTGTACTGCAAACTCTAACCCTACAGCATATAAACTAGCTACTGGTAGCAATAC AATTAGTGTATCTGGTACAGTCACGGTTGATGGTAAAACAATTGATCTAGCTACAGAAGTACAACCTGTTGTGGAGGATA CTGTGGCGATTGAAAATAGCTATACGTTCCAGAAAGGATTACCATCAGGAGCAATTATTACGACTCTTGTGGCTAGTTTG AATGCAAATGCTGCTAAAGCACATGGAACTTTTGCTGCTGACGGAAGCGGTTCTTTCAATATGACATTTGACAAAGGATA CACTTGGTTAAAAGATGTAGATCCAGCATATGGTACAGAAATCAACAAAGGTTCAGGTAGAGACTCTGCGCTTGCTACAT GGGATACAAAAACTAACAAGCAGTATAGATAG
Upstream 100 bases:
>100_bases GAGTAGAAAGTAAGACTCCACTGCACGATATCCAAGGAACAATTACGTGGAATGCACCATCTACTGCTAGTTTGGCTGAT AGTGCTAGTGTTAAGAGTAA
Downstream 100 bases:
>100_bases CACTGGCTATACACAGAATGGTTTTGTCAGGGGTGATACTGTGCTTTGGTTGGCTGGTTGTTGGCCGAATTATTAAAAAA TCTTGATCATAATTTGGAGA
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGVGCQDDNCTANSNPTAYKLATGSNTISVSGTVTVDGKTIDLATEVQPVVEDTVAIENSYTFQKGLPSGAIITTLVASL NANAAKAHGTFAADGSGSFNMTFDKGYTWLKDVDPAYGTEINKGSGRDSALATWDTKTNKQYR
Sequences:
>Translated_143_residues MGVGCQDDNCTANSNPTAYKLATGSNTISVSGTVTVDGKTIDLATEVQPVVEDTVAIENSYTFQKGLPSGAIITTLVASL NANAAKAHGTFAADGSGSFNMTFDKGYTWLKDVDPAYGTEINKGSGRDSALATWDTKTNKQYR >Mature_142_residues GVGCQDDNCTANSNPTAYKLATGSNTISVSGTVTVDGKTIDLATEVQPVVEDTVAIENSYTFQKGLPSGAIITTLVASLN ANAAKAHGTFAADGSGSFNMTFDKGYTWLKDVDPAYGTEINKGSGRDSALATWDTKTNKQYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14969; Mature: 14837
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGCQDDNCTANSNPTAYKLATGSNTISVSGTVTVDGKTIDLATEVQPVVEDTVAIENS CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCEEEECCCCCHHHHHEEEECCC YTFQKGLPSGAIITTLVASLNANAAKAHGTFAADGSGSFNMTFDKGYTWLKDVDPAYGTE CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCEEECCCCCCCCCC INKGSGRDSALATWDTKTNKQYR CCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure GVGCQDDNCTANSNPTAYKLATGSNTISVSGTVTVDGKTIDLATEVQPVVEDTVAIENS CCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCEEEECCCCCHHHHHEEEECCC YTFQKGLPSGAIITTLVASLNANAAKAHGTFAADGSGSFNMTFDKGYTWLKDVDPAYGTE CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCEEECCCCCCCCCC INKGSGRDSALATWDTKTNKQYR CCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA