| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is tgt [H]
Identifier: 89256203
GI number: 89256203
Start: 824555
End: 825658
Strand: Direct
Name: tgt [H]
Synonym: FTL_0843
Alternate gene names: 89256203
Gene position: 824555-825658 (Clockwise)
Preceding gene: 89256201
Following gene: 89256205
Centisome position: 43.49
GC content: 37.14
Gene sequence:
>1104_bases ATGACTGTAATGAAGTTTGATCTAATCAAAAAAGAGGGTAAAGCCCGCAGAGGTAAGATTACTTTTCCTCGTGGTGATAT TCAAACACCTGCATTTATGCCAGTAGGTACTTATGGTGCTGTCAAATCACTATCTCCAGTTGAGTTAAAAGAGATGGGGG CAGAGATTATTTTGGGTAATACATTTCATTTATGGTTACGTCCTGGCACAGAGATTATCAAAAAACATGGTTCACTCCAT GGCTTTAACGGCTGGGATAAGCCTATTTTGACAGATTCTGGAGGTTTTCAGGTTTTTAGTTTGGGCAAGATGCGTAAGCT AACAGAAGAGGGTGTGACATTTAAATCACCTGTTAATAGTTCTAAGGTATTTTTATCACCTGAAATATCAATGCAAGTGC AAAGAGATTTAGGCTCAGATATCGTGATGTGTTTTGATGAATGTACGCCATACCCAGCTACGGAAAAAGAAGCTAAAGAA TCTATGGAGCTATCTATGCGCTGGGCAAAAAGATCAAAAGAAGCTCATGGTGATAATCCATCGGCATTATTTGGGATTAT TCAAGGTGGTATGTATGAGCACTTACGTGATGAGTCGTTGGCAAAGTTAAAAGAGATTGATTTTGATGGTTTTGCTATTG GTGGCTTATCTGTTGGCGAGCCTAAAGAAGATATGATTAGAATACTTGATCATACCGCACATCAAATGCCAGAAGATAAA CCAAGATATCTGATGGGAGTTGGCACTCCAAAAGATCTAGTTGAGGCGGTGTATCGTGGAGTAGATATGTTTGATTGTGT TATGCCATCTCGAAATGCTCGCAATGGTCATATCTTCACTTCAGAAGGGGTGATTAAAATCAGAAACTCTAAGTATAAAG ATGATACTTCACCATTAGATCCAAACTGTGATTGCTATACTTGTAAAAATTTTACTAAGAGCTATTTGCATCATCTTGAT AAAACCAAAGAGATTCTAGGCTCTAGGTTAAATACTATTCATAATTTAACTTTCTACCAAAATCTTATGAAATCTATCCG TAAGGCACTAGACGAAGGTAGATTTTCAGAGTTTAGAAAAGAGTTTTTAGCAAGCTATAAATAA
Upstream 100 bases:
>100_bases CAGTTTTTTGATCCTGTGATTAAGCCATAGGGCGACGGAGAGGATTTAAAGTGTGTTGGGTTATCTATACTAATTATCTA TTTTTATAAGGTTAATTATT
Downstream 100 bases:
>100_bases GTCTAACTACTTGAAATAAGAAGTCAGTAATCCTTTAATTTTATCAAAATTTTCAGTTTCTGAGTCTTTTGCTAAAAGGT AATATGATTTTCCTGTTGAG
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTVMKFDLIKKEGKARRGKITFPRGDIQTPAFMPVGTYGAVKSLSPVELKEMGAEIILGNTFHLWLRPGTEIIKKHGSLH GFNGWDKPILTDSGGFQVFSLGKMRKLTEEGVTFKSPVNSSKVFLSPEISMQVQRDLGSDIVMCFDECTPYPATEKEAKE SMELSMRWAKRSKEAHGDNPSALFGIIQGGMYEHLRDESLAKLKEIDFDGFAIGGLSVGEPKEDMIRILDHTAHQMPEDK PRYLMGVGTPKDLVEAVYRGVDMFDCVMPSRNARNGHIFTSEGVIKIRNSKYKDDTSPLDPNCDCYTCKNFTKSYLHHLD KTKEILGSRLNTIHNLTFYQNLMKSIRKALDEGRFSEFRKEFLASYK
Sequences:
>Translated_367_residues MTVMKFDLIKKEGKARRGKITFPRGDIQTPAFMPVGTYGAVKSLSPVELKEMGAEIILGNTFHLWLRPGTEIIKKHGSLH GFNGWDKPILTDSGGFQVFSLGKMRKLTEEGVTFKSPVNSSKVFLSPEISMQVQRDLGSDIVMCFDECTPYPATEKEAKE SMELSMRWAKRSKEAHGDNPSALFGIIQGGMYEHLRDESLAKLKEIDFDGFAIGGLSVGEPKEDMIRILDHTAHQMPEDK PRYLMGVGTPKDLVEAVYRGVDMFDCVMPSRNARNGHIFTSEGVIKIRNSKYKDDTSPLDPNCDCYTCKNFTKSYLHHLD KTKEILGSRLNTIHNLTFYQNLMKSIRKALDEGRFSEFRKEFLASYK >Mature_366_residues TVMKFDLIKKEGKARRGKITFPRGDIQTPAFMPVGTYGAVKSLSPVELKEMGAEIILGNTFHLWLRPGTEIIKKHGSLHG FNGWDKPILTDSGGFQVFSLGKMRKLTEEGVTFKSPVNSSKVFLSPEISMQVQRDLGSDIVMCFDECTPYPATEKEAKES MELSMRWAKRSKEAHGDNPSALFGIIQGGMYEHLRDESLAKLKEIDFDGFAIGGLSVGEPKEDMIRILDHTAHQMPEDKP RYLMGVGTPKDLVEAVYRGVDMFDCVMPSRNARNGHIFTSEGVIKIRNSKYKDDTSPLDPNCDCYTCKNFTKSYLHHLDK TKEILGSRLNTIHNLTFYQNLMKSIRKALDEGRFSEFRKEFLASYK
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=364, Percent_Identity=41.4835164835165, Blast_Score=310, Evalue=9e-85, Organism=Homo sapiens, GI13375872, Length=282, Percent_Identity=26.5957446808511, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1786607, Length=361, Percent_Identity=64.819944598338, Blast_Score=514, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17544680, Length=364, Percent_Identity=41.2087912087912, Blast_Score=303, Evalue=1e-82, Organism=Caenorhabditis elegans, GI25146502, Length=138, Percent_Identity=36.231884057971, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI19920510, Length=354, Percent_Identity=45.4802259887006, Blast_Score=335, Evalue=4e-92, Organism=Drosophila melanogaster, GI21355311, Length=246, Percent_Identity=29.2682926829268, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 41484; Mature: 41353
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVMKFDLIKKEGKARRGKITFPRGDIQTPAFMPVGTYGAVKSLSPVELKEMGAEIILGN CCEEEHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCEEEECC TFHLWLRPGTEIIKKHGSLHGFNGWDKPILTDSGGFQVFSLGKMRKLTEEGVTFKSPVNS EEEEEECCCHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECHHHHHHHHCCCEEECCCCC SKVFLSPEISMQVQRDLGSDIVMCFDECTPYPATEKEAKESMELSMRWAKRSKEAHGDNP CEEEECCCHHHHHHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH SALFGIIQGGMYEHLRDESLAKLKEIDFDGFAIGGLSVGEPKEDMIRILDHTAHQMPEDK HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCC PRYLMGVGTPKDLVEAVYRGVDMFDCVMPSRNARNGHIFTSEGVIKIRNSKYKDDTSPLD CCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCC PNCDCYTCKNFTKSYLHHLDKTKEILGSRLNTIHNLTFYQNLMKSIRKALDEGRFSEFRK CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EFLASYK HHHHCCC >Mature Secondary Structure TVMKFDLIKKEGKARRGKITFPRGDIQTPAFMPVGTYGAVKSLSPVELKEMGAEIILGN CEEEHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCEEEECC TFHLWLRPGTEIIKKHGSLHGFNGWDKPILTDSGGFQVFSLGKMRKLTEEGVTFKSPVNS EEEEEECCCHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECHHHHHHHHCCCEEECCCCC SKVFLSPEISMQVQRDLGSDIVMCFDECTPYPATEKEAKESMELSMRWAKRSKEAHGDNP CEEEECCCHHHHHHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH SALFGIIQGGMYEHLRDESLAKLKEIDFDGFAIGGLSVGEPKEDMIRILDHTAHQMPEDK HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCC PRYLMGVGTPKDLVEAVYRGVDMFDCVMPSRNARNGHIFTSEGVIKIRNSKYKDDTSPLD CCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCC PNCDCYTCKNFTKSYLHHLDKTKEILGSRLNTIHNLTFYQNLMKSIRKALDEGRFSEFRK CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EFLASYK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA