Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is cinA [C]
Identifier: 89256190
GI number: 89256190
Start: 811161
End: 811904
Strand: Reverse
Name: cinA [C]
Synonym: FTL_0830
Alternate gene names: 89256190
Gene position: 811904-811161 (Counterclockwise)
Preceding gene: 89256193
Following gene: 89256188
Centisome position: 42.82
GC content: 31.99
Gene sequence:
>744_bases ATGAAGTATGACTTTGGATTTATCGCAATTGGTGATGAAATAACAGATGGCGATATTGTCAACACAAACTCTAGTACATT TGCAAAATACCTTGCCAGCAAAGATTTTCAGATTGGTTTTCATGTAAGCTGTAAAGATAGTTATGATGACATTATAGCCA GTTTAGAGTTCTTAAAATCAACACATAAAAATATCATAACCATAGGTGGTTTAGGGCCTACAGAAGATGATTTAACCACA GAAACAATCGCAAAATATTTTGATAAAAAGCTCGTTCTTGATCAGCCTTCTTGGCAAAGGTTAGAGCAAAGAATGCTCTC CAAATATGGTAAAATTACTTTGGGAACCAAAAAACAAGCAATGTTTCCTCAAGGTTCACAAATTTTGATAAATACAAATG GTACAGCTAATGGTTTTAAACTAGAGTTTGGTCAAGATAGATATATCTATGTTTTCCCTGGTCCCCCTAAAGAATGTATT AATATGCTTGAAGAATTAGAACTAACAAACACCCAACAAACCAGAAAAATTATCCGCAAAAGGTGGAATATTTATAATAT TGGTGAAAGCTTATTAGCAGAAAAATTACAAGTTATCAAAGATGTTTATTCTTTTGTTACATTCAAATATCGAATCGCAG ATAGCTTTATAGAGCTAAAATACTTCTATCCTGAAGGTTGTCCGCATAGCCAAAAAATAATAACAAATGTAGAAAATATT CTCAAAGATAACTTACAGAGTTAG
Upstream 100 bases:
>100_bases CTTGTATACACATAATATATACTTCATAAAACATAATATATAAAAAATATAATCAAGAGTAGCGGATTTTGATAAAGCTA TAAAAATTATAAGGAACATT
Downstream 100 bases:
>100_bases ATTTAGCTGCTCTTTTTTATCAATAAACATAGCATCTATATCCCATGCTAGTAGTTGTTTGGCTTCACAATCAGTATAAA CAGAATATACAAATATTTTG
Product: molybdopterin binding family protein, fragment
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKYDFGFIAIGDEITDGDIVNTNSSTFAKYLASKDFQIGFHVSCKDSYDDIIASLEFLKSTHKNIITIGGLGPTEDDLTT ETIAKYFDKKLVLDQPSWQRLEQRMLSKYGKITLGTKKQAMFPQGSQILINTNGTANGFKLEFGQDRYIYVFPGPPKECI NMLEELELTNTQQTRKIIRKRWNIYNIGESLLAEKLQVIKDVYSFVTFKYRIADSFIELKYFYPEGCPHSQKIITNVENI LKDNLQS
Sequences:
>Translated_247_residues MKYDFGFIAIGDEITDGDIVNTNSSTFAKYLASKDFQIGFHVSCKDSYDDIIASLEFLKSTHKNIITIGGLGPTEDDLTT ETIAKYFDKKLVLDQPSWQRLEQRMLSKYGKITLGTKKQAMFPQGSQILINTNGTANGFKLEFGQDRYIYVFPGPPKECI NMLEELELTNTQQTRKIIRKRWNIYNIGESLLAEKLQVIKDVYSFVTFKYRIADSFIELKYFYPEGCPHSQKIITNVENI LKDNLQS >Mature_247_residues MKYDFGFIAIGDEITDGDIVNTNSSTFAKYLASKDFQIGFHVSCKDSYDDIIASLEFLKSTHKNIITIGGLGPTEDDLTT ETIAKYFDKKLVLDQPSWQRLEQRMLSKYGKITLGTKKQAMFPQGSQILINTNGTANGFKLEFGQDRYIYVFPGPPKECI NMLEELELTNTQQTRKIIRKRWNIYNIGESLLAEKLQVIKDVYSFVTFKYRIADSFIELKYFYPEGCPHSQKIITNVENI LKDNLQS
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=225, Percent_Identity=28.8888888888889, Blast_Score=87, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323832, Length=221, Percent_Identity=25.7918552036199, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 28338; Mature: 28338
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDFGFIAIGDEITDGDIVNTNSSTFAKYLASKDFQIGFHVSCKDSYDDIIASLEFLKS CCCCCEEEEECCCCCCCCEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH THKNIITIGGLGPTEDDLTTETIAKYFDKKLVLDQPSWQRLEQRMLSKYGKITLGTKKQA HCCCEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCEEECCCCCC MFPQGSQILINTNGTANGFKLEFGQDRYIYVFPGPPKECINMLEELELTNTQQTRKIIRK CCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHH RWNIYNIGESLLAEKLQVIKDVYSFVTFKYRIADSFIELKYFYPEGCPHSQKIITNVENI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHH LKDNLQS HHHHCCC >Mature Secondary Structure MKYDFGFIAIGDEITDGDIVNTNSSTFAKYLASKDFQIGFHVSCKDSYDDIIASLEFLKS CCCCCEEEEECCCCCCCCEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH THKNIITIGGLGPTEDDLTTETIAKYFDKKLVLDQPSWQRLEQRMLSKYGKITLGTKKQA HCCCEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCEEECCCCCC MFPQGSQILINTNGTANGFKLEFGQDRYIYVFPGPPKECINMLEELELTNTQQTRKIIRK CCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHH RWNIYNIGESLLAEKLQVIKDVYSFVTFKYRIADSFIELKYFYPEGCPHSQKIITNVENI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHH LKDNLQS HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA