| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256169
Identifier: 89256169
GI number: 89256169
Start: 783866
End: 784456
Strand: Direct
Name: 89256169
Synonym: FTL_0799
Alternate gene names: NA
Gene position: 783866-784456 (Clockwise)
Preceding gene: 89256168
Following gene: 89256170
Centisome position: 41.34
GC content: 29.95
Gene sequence:
>591_bases ATGATAAAAAACAAAAAGTTTAAAAAAATATTTTTTATAATTTTAATTGGTAGTTATAATTTAGCTTTTGCTAGTTATGA GTCAAGAATAAATGAGGTAAATCAGTTGATTCAAGCAAATATGAAAAGTGTTAAAAGTACAGAAAAGCTTGATATTCCTG AGTATAAGGGTGATACATTAACTTTTGAAAGATTATCAAAAATACGTAACGTTTTTAATATGGATCACTATCTACCATTT GAAAAGAAAGCGCCAATTATTAGATCACAACAAAATAAAAATATTGTTAAGTTAAAACCAATAGTGATTCCACCAGAGCT ACAAAAGATTATGGACGCTAAAGCTACTAGTTTACAGCGTTATCCATTGGATTCTTTTAAGTTCAAGGGGGTGGTATATC AAAATAATCAAAAATGGGGTGTTGTTGAAAACTCAATGGAAAATAAACCAATGTATCTGAAAAAAGGTGAGCTAGTAGGC CAAAATTATGGTCAGGTAGAAGATGTAACCAAAGAAGGTATTGTTATTGATGAGTGGAAGAAGGATGACCTCAAGAGAGT CTGGGAAAAGATTCAAACTGTTATACATTAG
Upstream 100 bases:
>100_bases TTATCACCAATATAAATATTAAAAAAGAGTCTGATGATAAATTAGTTACAGAACTAAACTTACAGACCTATTCGCGTCAA GGAGTGGGGGTTTAGTTTAG
Downstream 100 bases:
>100_bases TAAGGTAAAGTGATGTTTTTTGCAAAAAAGAAGTTATTAGTTGTTCTAACAATATTGGGTGGTATTCTAGGTTATGATGT CTCGGTAGCTGATACTAAAG
Product: Type IV pili lipoprotein.
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MIKNKKFKKIFFIILIGSYNLAFASYESRINEVNQLIQANMKSVKSTEKLDIPEYKGDTLTFERLSKIRNVFNMDHYLPF EKKAPIIRSQQNKNIVKLKPIVIPPELQKIMDAKATSLQRYPLDSFKFKGVVYQNNQKWGVVENSMENKPMYLKKGELVG QNYGQVEDVTKEGIVIDEWKKDDLKRVWEKIQTVIH
Sequences:
>Translated_196_residues MIKNKKFKKIFFIILIGSYNLAFASYESRINEVNQLIQANMKSVKSTEKLDIPEYKGDTLTFERLSKIRNVFNMDHYLPF EKKAPIIRSQQNKNIVKLKPIVIPPELQKIMDAKATSLQRYPLDSFKFKGVVYQNNQKWGVVENSMENKPMYLKKGELVG QNYGQVEDVTKEGIVIDEWKKDDLKRVWEKIQTVIH >Mature_196_residues MIKNKKFKKIFFIILIGSYNLAFASYESRINEVNQLIQANMKSVKSTEKLDIPEYKGDTLTFERLSKIRNVFNMDHYLPF EKKAPIIRSQQNKNIVKLKPIVIPPELQKIMDAKATSLQRYPLDSFKFKGVVYQNNQKWGVVENSMENKPMYLKKGELVG QNYGQVEDVTKEGIVIDEWKKDDLKRVWEKIQTVIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23003; Mature: 23003
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNKKFKKIFFIILIGSYNLAFASYESRINEVNQLIQANMKSVKSTEKLDIPEYKGDTL CCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE TFERLSKIRNVFNMDHYLPFEKKAPIIRSQQNKNIVKLKPIVIPPELQKIMDAKATSLQR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHC YPLDSFKFKGVVYQNNQKWGVVENSMENKPMYLKKGELVGQNYGQVEDVTKEGIVIDEWK CCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCEEEECCC KDDLKRVWEKIQTVIH HHHHHHHHHHHHHHCC >Mature Secondary Structure MIKNKKFKKIFFIILIGSYNLAFASYESRINEVNQLIQANMKSVKSTEKLDIPEYKGDTL CCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE TFERLSKIRNVFNMDHYLPFEKKAPIIRSQQNKNIVKLKPIVIPPELQKIMDAKATSLQR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHC YPLDSFKFKGVVYQNNQKWGVVENSMENKPMYLKKGELVGQNYGQVEDVTKEGIVIDEWK CCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCEEEECCC KDDLKRVWEKIQTVIH HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA