| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256168
Identifier: 89256168
GI number: 89256168
Start: 783264
End: 783860
Strand: Direct
Name: 89256168
Synonym: FTL_0798
Alternate gene names: NA
Gene position: 783264-783860 (Clockwise)
Preceding gene: 89256167
Following gene: 89256169
Centisome position: 41.31
GC content: 32.16
Gene sequence:
>597_bases ATGGTAGATAAAATACAGAGCTTTTTATCTAGTAAGCACATCAATAAGATTATAAATGCACCCATAAAGATTAGACTACC AATAATGATTGCGGTATTTGGATTATTTATATTTGTTTTTTATGGGCTATTAGTAAGCCCGGTTCTTTCAAAAGCCAATC AAGTTCAAAATCATATTCAGTCAATGGAAGCACAGATCCCAAGACTTGTAAAAAAAGAAAAAGATTTAGCAGCATTAAAA GAACAAGTTAAAATGCTAGAGCAGCATAACACTGAAGAGAGATTTAGTATTCCTGAGCGCCACTCGATACCTATATTCCT ATCAGCTCTTAATGAAGCTATTAGTAGTTCAGGTATAACGATTATAGACTTATCGCCAGCTGGCGTTGAAAAAAATAAAT ATTTAGACTTATATGCTTTAGATTTTAAAGCGAAATTATCTGGTAACTTCTCGCAATTAATCAAGCTTTTCGTTGCTTTA ATTGATATGAAAGATATTGCTGTTATCACCAATATAAATATTAAAAAAGAGTCTGATGATAAATTAGTTACAGAACTAAA CTTACAGACCTATTCGCGTCAAGGAGTGGGGGTTTAG
Upstream 100 bases:
>100_bases TCGAACTTAAAAATTTAGGTTCAGAGAAAAATGGTCAAAGAAGTTTCTCTTTAGAATTTAAATTTGGAGAGGGTAACGCA TTTAAGGGAGAGAGTGTTAA
Downstream 100 bases:
>100_bases TTTAGATGATAAAAAACAAAAAGTTTAAAAAAATATTTTTTATAATTTTAATTGGTAGTTATAATTTAGCTTTTGCTAGT TATGAGTCAAGAATAAATGA
Product: Type IV pili glycosylation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MVDKIQSFLSSKHINKIINAPIKIRLPIMIAVFGLFIFVFYGLLVSPVLSKANQVQNHIQSMEAQIPRLVKKEKDLAALK EQVKMLEQHNTEERFSIPERHSIPIFLSALNEAISSSGITIIDLSPAGVEKNKYLDLYALDFKAKLSGNFSQLIKLFVAL IDMKDIAVITNINIKKESDDKLVTELNLQTYSRQGVGV
Sequences:
>Translated_198_residues MVDKIQSFLSSKHINKIINAPIKIRLPIMIAVFGLFIFVFYGLLVSPVLSKANQVQNHIQSMEAQIPRLVKKEKDLAALK EQVKMLEQHNTEERFSIPERHSIPIFLSALNEAISSSGITIIDLSPAGVEKNKYLDLYALDFKAKLSGNFSQLIKLFVAL IDMKDIAVITNINIKKESDDKLVTELNLQTYSRQGVGV >Mature_198_residues MVDKIQSFLSSKHINKIINAPIKIRLPIMIAVFGLFIFVFYGLLVSPVLSKANQVQNHIQSMEAQIPRLVKKEKDLAALK EQVKMLEQHNTEERFSIPERHSIPIFLSALNEAISSSGITIIDLSPAGVEKNKYLDLYALDFKAKLSGNFSQLIKLFVAL IDMKDIAVITNINIKKESDDKLVTELNLQTYSRQGVGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22252; Mature: 22252
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDKIQSFLSSKHINKIINAPIKIRLPIMIAVFGLFIFVFYGLLVSPVLSKANQVQNHIQ CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMEAQIPRLVKKEKDLAALKEQVKMLEQHNTEERFSIPERHSIPIFLSALNEAISSSGIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCE IIDLSPAGVEKNKYLDLYALDFKAKLSGNFSQLIKLFVALIDMKDIAVITNINIKKESDD EEECCCCCCCCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC KLVTELNLQTYSRQGVGV HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVDKIQSFLSSKHINKIINAPIKIRLPIMIAVFGLFIFVFYGLLVSPVLSKANQVQNHIQ CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMEAQIPRLVKKEKDLAALKEQVKMLEQHNTEERFSIPERHSIPIFLSALNEAISSSGIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCE IIDLSPAGVEKNKYLDLYALDFKAKLSGNFSQLIKLFVALIDMKDIAVITNINIKKESDD EEECCCCCCCCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC KLVTELNLQTYSRQGVGV HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA