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The map label for this gene is dedA [H]

Identifier: 89256111

GI number: 89256111

Start: 712811

End: 713437

Strand: Reverse

Name: dedA [H]

Synonym: FTL_0722

Alternate gene names: 89256111

Gene position: 713437-712811 (Counterclockwise)

Preceding gene: 89256112

Following gene: 89256110

Centisome position: 37.63

GC content: 28.07

Gene sequence:

>627_bases
ATGTTTGATTTTATTATACATTTTAATGAGTATATAAATTATTTTATTGATCTTTTAGGTGTATGGTTCTACATATTATT
ATTTTTTATCGTTTTTTGTGAAACTGGAATTGTTTTAGGTATATTTTTTCCAGGCGATTCTCTACTCTTTACAATAGGTA
TTACAGCTGCTGCTACAACTATTAACATCCATCTAGCAGTATTAGCGATATGCTTAGGTGCTATAATCGGCGACTCATGT
AACTATATTACTGGTAAATTTATTGGAGAAAAACTCTTTAGTACACACGCACGAATTCTCAAAAAAGCCTATTTGATAAA
AACCAAAGAATTCTTAGAAAAATATGGTACAAAAGCAATAATTTTTTCACGTTTTATTGCATTTGTAAGAACTATTACAC
CTTTTGTAGCTGGTGTAACTAGAATGAATTATGCAAAATTTGTCACATTAGGGACAATATCAGCAATTATATGGTCTTTT
TCGATAACCTATACAGTTTACTTCTTTAGTGATAACCAATTTGTTAAGCAAAATCTAAGCCTTTTAATTGCTATAGTAGT
TGTTGCTGTAATTATTCAAATACTTATCAAGGGTATTATCAATAAAATAAAAGCAAAAAGAACTTAA

Upstream 100 bases:

>100_bases
AACAAAAATTCAGGCACACAAACAGATATTCAAAGCTGTTGAAGATTTAATGCCATACATTCATGCTTTGTCAATAAAGA
TCAAACCGGAGTAGGATATA

Downstream 100 bases:

>100_bases
CCTTTAGAAATTATTTTTTTATAATCTAACGACAAAACATTCAAAAGCATAACTCATGGATACAATCTCGGCATTATTAA
ATATTGTCTTGCATCTAGAT

Product: DedA family protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MFDFIIHFNEYINYFIDLLGVWFYILLFFIVFCETGIVLGIFFPGDSLLFTIGITAAATTINIHLAVLAICLGAIIGDSC
NYITGKFIGEKLFSTHARILKKAYLIKTKEFLEKYGTKAIIFSRFIAFVRTITPFVAGVTRMNYAKFVTLGTISAIIWSF
SITYTVYFFSDNQFVKQNLSLLIAIVVVAVIIQILIKGIINKIKAKRT

Sequences:

>Translated_208_residues
MFDFIIHFNEYINYFIDLLGVWFYILLFFIVFCETGIVLGIFFPGDSLLFTIGITAAATTINIHLAVLAICLGAIIGDSC
NYITGKFIGEKLFSTHARILKKAYLIKTKEFLEKYGTKAIIFSRFIAFVRTITPFVAGVTRMNYAKFVTLGTISAIIWSF
SITYTVYFFSDNQFVKQNLSLLIAIVVVAVIIQILIKGIINKIKAKRT
>Mature_208_residues
MFDFIIHFNEYINYFIDLLGVWFYILLFFIVFCETGIVLGIFFPGDSLLFTIGITAAATTINIHLAVLAICLGAIIGDSC
NYITGKFIGEKLFSTHARILKKAYLIKTKEFLEKYGTKAIIFSRFIAFVRTITPFVAGVTRMNYAKFVTLGTISAIIWSF
SITYTVYFFSDNQFVKQNLSLLIAIVVVAVIIQILIKGIINKIKAKRT

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=207, Percent_Identity=42.512077294686, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI1789481, Length=150, Percent_Identity=30.6666666666667, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1789384, Length=156, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23509; Mature: 23509

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFIIHFNEYINYFIDLLGVWFYILLFFIVFCETGIVLGIFFPGDSLLFTIGITAAATT
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHH
INIHLAVLAICLGAIIGDSCNYITGKFIGEKLFSTHARILKKAYLIKTKEFLEKYGTKAI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IFSRFIAFVRTITPFVAGVTRMNYAKFVTLGTISAIIWSFSITYTVYFFSDNQFVKQNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHH
LLIAIVVVAVIIQILIKGIINKIKAKRT
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFDFIIHFNEYINYFIDLLGVWFYILLFFIVFCETGIVLGIFFPGDSLLFTIGITAAATT
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHH
INIHLAVLAICLGAIIGDSCNYITGKFIGEKLFSTHARILKKAYLIKTKEFLEKYGTKAI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IFSRFIAFVRTITPFVAGVTRMNYAKFVTLGTISAIIWSFSITYTVYFFSDNQFVKQNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHH
LLIAIVVVAVIIQILIKGIINKIKAKRT
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]